Pseudoliparis swirei (Mariana hadal snailfish): 130209542
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Entry
130209542 CDS
T09868
Symbol
zmp:0000001200
Name
(RefSeq) dedicator of cytokinesis protein 9 isoform X1
KO
K21853
dedicator of cytokinesis protein 9/10/11
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130209542 (zmp:0000001200)
Membrane trafficking [BR:
pswi04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
130209542 (zmp:0000001200)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DOCK_C-D_N
DHR-2_Lobe_C
DHR-2_Lobe_B
PH
TPR_DOCK
PH_9
Motif
Other DBs
NCBI-GeneID:
130209542
NCBI-ProteinID:
XP_056295254
LinkDB
All DBs
Position
2:9181668..9256891
Genome browser
AA seq
2086 aa
AA seq
DB search
MATAAQTETRRFTRGLGKPGTAAELRHSVSEVVRTSVLVVKPKVIEPLDYENVLVQRKTQ
ILSDVLRDMLQFPHEDFEISTLRQQGRTLYPTVPENAEREARSLFVQECIKAYKSDWHVV
NYKYEDYSADFRQLPNKVSRPDKLAVHVFEVDEDVDKDEDTASLGSQKGGISKHGWLYKG
NINNAISVTMRSFKRRYFHLTQLGDGSYNLNFYKDEKISKEPKGSIFLDSCMGVVQNTKV
RRFAFELKMQDKSTYLLASDCEGEMEDWINTLNKILHSSFEIAMQEKRNGDIHDDDDLGK
SDSSSGSMDSFQSARDIESRMRNETRLKLFTLDPETQKLDFSGIEPDVKQFEEKFGKRVL
VNCNDLSFNLQSCVAENEEGPTTNVEPFYVTLSLFDIQNGRKISSDFHVDLNHLSVRGMV
PSNTSHYMNGGGDTHPEGQRLVHGVPEAAMQYPRQGVFSVTCPHPDIFLVARIEKVLQGG
INHCAEPYMKSSDSTKVAQKVLKNAKLACGRLGHFRMPFAWAARPLFKDASGTLDKSVRF
SALYRQDNNKLSNDDMLKLLADFRKPEKMAKLPVILGNLDVTIDNVAPDLTNCVTSSYIP
VKQFDVSEKTNIFFEVEEFVPHIAKCSQPFTIYNNHLYVYPKHLKYDSQKSFAKARNIAV
CIEFKDSDEEEAVVLKCIYGRPGGPLFTKNAFAAVLHHQHNPEFYDEFKIELPTQLHEKH
HLLFTFHHVSCDNNSKASTKKRDLVETQVGYAWLPLLKDGRVTMNESQIPVAANLPAGYL
NCQEGAGKHSGSEVKWVDGGRPLFKVSTHLVSTVYTQDQHLHNFFHHCESIPPAPQVFGG
ELVKYLKSLHAMESHVMVKFLPTTLNQLFRVLTNATQEDVAVNVTRVMIHIVAQCHEEGL
EHFLRSYVKFVFKAEPQASSTTRLVHEELAKAMTVILKPSTDFLTSNKLLKYSWYFFEAL
VKSMAQYLIESCKVKLSRNQRFSASFHHTVETLVNMMMPHITQKYKDNLDAARNANHSLA
VFIKRCLNLMDRGFMFKQINNYVNCFMPGDPKTLFEFRFEFLQVVCNHEHYVPLNLPMPF
GKGRILRFQDLQMDYSLTDDFNKNHFLVALLLREVRAALQELREIRQIAIHVLKNLMMKH
TFDDRYTSKSQQARLATLYFPLFGLLQENVNRLNVKEVSPFTINHSNNNGREDSLPTNTM
MTPPRSSTFLDTSLHKDVFGVISGTSSPHTSSTPNINSVRHADSRGSLISTDSGNSFSEK
NNDKGNSLDTNQAASTLASTLVRCDKLDQAEIKSLLMCFLHVLKSMSEDALFTYWNKASS
AELMDFFTLVEVCLHQFRYMGKRYIARSQDGAGPVAHERKSQTLPVSRNRAGMMHTRLQQ
LSSLDNSYTFNHTYSHSDADVLNQSVLEANIATEVCLTVLDTLSIFIMGFKTQLCSDHGH
SPLMKRVFEVHLCFLRINQSETALKQVFTSLRTFIYKFPCTFFEGRADMCAAFCYEILKC
CNSKLSSIRSDAAHLLYFLMKSNFDYTGRKSFVRTHLQVVIAVSQLIADVIGIGSTRFQQ
SLSIINNCANSDKTIKNTAFPSDVKDLTKRIRTVLMATAQMKEHERDPEMLVDLQYSLAK
SYASTPELRKTWLDSMARIHVKNGDLSEAAMCYVHVAALVAEYLRRKGMFKQGCSAFRVV
TPNIDEEAAMMEDVGMQDVHFNEDVLMELLEECADGLWKAERYELICDIYKLIIPIYEKR
RDFEKLAHLYDTLHRAYSKVTEVMHTGKRLLGTYFRVAFFGQGFFEDEDGKEYIYKEPKF
TPLSEISQRLLKLYSDKFGQENVKIIQDSGRINPKDLDSKYAYIQVTHVTPYLEEKELVD
RKTDFEKSHNIRRFVFEMPFTISGKKQGGVEEQCKRRTILTTTHCFPYVKKRIAVMYQHH
TDLSPIEVAIDEMSKKVAEIQQLCSSSEVDMIRLQLKLQGSISVQVNAGPLAYARAFLDD
ASAKKNPDNKVKQLKEVFRHFVEACGHGLGINERLIKEDQQEYQDEMKASYRDLAKELSI
IMHEQISPVEDGMKSVHPDSLQIFNAISGTPTSATIHGIPSSSSVV
NT seq
6261 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcagcgcagacggagaccaggaggtttacgcggggtctggggaagcccggc
accgcggcggaactcaggcacagtgtctccgaggtggttcggacgtccgtgctagttgtt
aagccgaaggtcatcgagccgctggactatgaaaatgtgctggtgcagaggaagacacaa
atcctcagtgatgtcctcagagacatgctgcagttcccccatgaagactttgagatttca
actttgaggcagcaaggaagaactctctaccctacagtgcctgaaaatgctgagagggag
gcccggagtctgtttgtccaagagtgcattaaggcctacaaatcggactggcatgtcgtc
aactacaagtatgaggactattctgcagactttcgacagcttccaaacaaagtgtccagg
cccgataaactggctgtccatgtatttgaagtggacgaggatgtcgacaaagatgaggat
acggcctccctcggatcacagaaaggcgggatttccaaacatggctggctgtataaaggc
aacataaacaatgctatcagcgtcaccatgaggtcattcaagaggagatatttccatctt
acccagctcggggacggctcttataatttaaacttttacaaggatgagaagatctccaaa
gagcccaaaggaagcattttcttggactcctgtatgggtgtggttcagaacaccaaggtc
cggcggtttgcttttgagctgaagatgcaggataagagcacctacctgctggcctccgac
tgtgaaggagagatggaggattggatcaacacgctcaacaagatcttgcacagcagcttt
gagattgccatgcaggagaagaggaatggagacattcatgatgatgatgatcttggaaag
tccgacagttcctctggcagcatggacagctttcagagtgcaagagatatagagtctagg
atgaggaacgagacccggttgaagttgttcacgctggaccctgagacacagaaactagat
ttctcaggaatagagccggatgtgaagcagtttgaggagaagtttggcaagcgtgttctg
gtgaactgcaacgacctctccttcaacctgcaaagctgcgtggccgagaacgaggaggga
ccaaccaccaacgtggagccattttatgtcaccctgtcgctgttcgacatccagaacggc
cggaagatctcctctgacttccacgtggacttaaaccacctgtctgtcaggggcatggtg
cccagtaacaccagtcactatatgaacgggggaggggacacccacccagaggggcaacga
ttggtccatggagtgccagaggcagccatgcagtatccaagacagggagtgttctcggta
acatgcccccatcccgatatcttcctagtggctcgcatagagaaggtgcttcagggggga
atcaaccactgtgctgagccctacatgaagagttcagactccaccaaggtggcacagaag
gtcctgaaaaatgccaagctggcatgtggccggttaggccatttcaggatgccttttgcc
tgggccgcaaggcctttatttaaagatgcttcagggacgcttgacaaaagtgttcgtttc
tccgctctgtacagacaggacaacaacaagctctccaatgacgatatgctcaaactgctc
gccgatttcagaaagccagagaagatggccaagctgcctgtaatcttaggaaaccttgat
gttaccatcgacaacgtggcccccgacttgacaaattgtgttacctcatcctacattcct
gtgaagcagtttgatgtcagtgagaagaccaacatcttctttgaagttgaggagtttgtg
ccgcacatagccaaatgttctcagcctttcaccatctacaacaatcacctctacgtttac
ccgaagcatttgaaatacgacagccaaaagtcattcgcaaaggctagaaacatagccgtc
tgcattgagttcaaggactctgatgaagaggaggcagttgtactgaagtgcatctatggc
cgacctggaggacccttgtttaccaaaaatgcctttgctgcagttttgcatcaccagcac
aaccccgaattctacgacgagtttaagattgagctaccaacccagctccacgagaagcac
catctgctcttcaccttccaccatgtcagctgtgacaacaacagcaaggccagcaccaaa
aagagagacctggttgagactcaagtggggtacgcctggctccccttgctgaaagatggg
cgggtgaccatgaacgagagtcagatccctgtggctgccaacctgcctgctggatacctc
aactgtcaggagggggccggcaagcattcaggctctgaagtcaaatgggtggacggagga
aggcctttatttaaggtgtccacccaccttgtttccactgtctacactcaggatcaacat
ttgcacaatttctttcaccactgtgaaagcatcccacctgccccccaggtgtttggagga
gaacttgttaaatacctgaagagtctgcatgccatggagagccatgtgatggtcaagttc
ctgcccaccaccctgaatcagctgtttagggtgctcaccaatgccacacaagaggacgtg
gcagtcaacgtcaccagagtcatgattcacattgttgcccagtgccacgaggaaggcttg
gagcacttcctgagatcatatgtcaagtttgtattcaaggctgagccacaagcgtcctct
accacccgactagtgcacgaggagctggctaaagccatgacggttatcttgaagccttcc
acagacttcctcacgagtaacaagctcctcaagtactcctggtatttctttgaagcctta
gtcaagtccatggctcaatacttgattgagagctgcaaagtgaagctgtcacggaatcag
cgcttctcagcatccttccatcacacggtggagacgctggtcaacatgatgatgccacac
atcactcagaagtataaagacaacctagacgctgccaggaatgccaaccacagtctggcg
gtcttcatcaagcgctgtttaaacctgatggacagaggcttcatgttcaagcagatcaac
aactacgtcaactgttttatgccaggagacccaaagacgctgtttgagttcaggtttgag
ttcctgcaggttgtgtgcaaccacgagcactacgtccccttaaacctgcccatgccattc
ggaaagggccgaatcctgagatttcaagacctccagatggattattcgctgacagatgac
ttcaacaagaaccacttcctggtcgcactgctgctccgggaggtccgtgcagctctgcag
gagctcagggagattcggcagatagccattcatgtgctgaagaatctgatgatgaagcac
acatttgatgaccgctacacctccaaaagccagcaggcccggttggccaccctgtacttt
cccttgtttggtctgctccaagagaacgtcaacaggctgaatgtgaaggaagtatcccca
ttcaccatcaaccactctaacaataatggaagagaagattcacttcctaccaacacaatg
atgacaccccccagatccagcacctttctggacaccagcttgcacaaagatgtctttgga
gtcatctctggcacctcttcacctcacacgtcgtcaacccccaacatcaactctgtgcgc
catgcagactcccgcggctcactcatcagcaccgattctggcaacagcttctctgagaag
aacaatgacaagggcaactctctggacacgaaccaggctgcttcaaccctggccagtacc
ctggtgcgatgtgataaactggaccaggccgagatcaagagtctcctcatgtgcttcttg
cacgtgctcaaaagcatgtctgaggatgctctgttcacgtactggaacaaggcttcgtcg
gctgagttgatggacttcttcactcttgtcgaggtgtgcctccatcagttcagatacatg
ggaaagagatacattgcaaggagccaggatggggcaggacccgtagcacatgagcggaag
tctcagactctgcctgtgtcccgtaacagggcgggaatgatgcatacccgcttacagcag
ctcagcagcctggataactcatacacatttaaccacacctacagtcactcggatgcagac
gtgttgaatcagtctgtgctggaggcaaacattgctactgaagtgtgcctgactgtcctg
gacacgctgagtatcttcatcatgggattcaagacccagctgtgctccgaccacggccac
agtccactcatgaagagggtgtttgaagtccacctctgtttcctacggatcaatcagtcg
gagacggccctcaagcaggtcttcacttcactgcgcaccttcatctacaagtttccttgc
acattttttgaagggcgtgctgacatgtgtgcagccttctgctacgagatcttgaagtgt
tgtaactccaagctgagctccattcgcagcgatgcagcccacctgctctacttcctcatg
aagagcaactttgactacacgggtcgcaaatcttttgtccggacgcacttacaggtggtg
attgctgtcagtcagttgatagctgatgtaattggcattggaagtacccgcttccagcag
tctctgtcaataatcaataactgtgccaacagtgacaaaactattaagaacacggccttc
ccatcggatgtgaaggacctgaccaaacgcatcagaaccgttttgatggccacggctcag
atgaaggagcacgagagagatccagagatgctggtggacctgcagtacagcctcgccaag
tcttacgccagcacgcctgaactacgcaagacctggctggacagcatggcccgaatccat
gtgaagaacggagacctgtccgaggcggccatgtgctacgtgcatgttgcagcacttgtg
gcagaatacctgcggcgaaaaggtatgttcaagcaggggtgctcagcgttccgcgtcgtg
actcccaacattgacgaagaggcagcgatgatggaggacgttggcatgcaggacgtccat
ttcaatgaagacgtcctaatggagcttttggaggagtgtgcagatggactgtggaaagcc
gagcgttacgagctcatctgtgacatctacaagctcatcatccccatttatgagaagcgg
agggactttgagaaactggcccacctgtacgacacgctgcatcgtgcatacagtaaagtg
acagaggtcatgcacacaggcaagaggctgctgggcacctacttcagagtggccttcttt
ggccagggcttctttgaagatgaagatggtaaggagtacatctacaaagaacccaaattc
acccctctgtccgagatttctcagaggctccttaagctgtactctgacaagtttggacag
gagaatgtgaagatcatccaggactctgggaggattaaccccaaagacctggactctaag
tatgcgtacatccaagttacacatgtgaccccttacctggaggagaaggagctggtggac
aggaagaccgactttgagaagagccacaacatccgtcgctttgtgtttgagatgccgttc
accatatcgggcaaaaagcaaggcggggtggaggagcagtgcaaacgcaggacaatacta
accacaacgcattgcttcccctacgtcaagaaacgtatcgcggtgatgtatcagcaccac
actgacctgagccccatcgaggtggccatcgacgagatgagcaagaaggtggccgagatc
caacagctttgctcctccagtgaggtggacatgatccgtctgcagctcaagctacagggc
agcatcagcgtccaggtgaatgcaggacctctggcgtatgcacgagcttttctcgacgac
gcgagcgccaagaagaatcctgataacaaggtcaagcagctgaaagaggtcttcaggcat
tttgtggaggcatgtggccacggtttgggtatcaatgagcggctgatcaaagaggaccag
caggagtatcaagacgagatgaaagccagctacagagacttagccaaagagctgtccatc
atcatgcatgagcaaatcagtcctgtggaagatggcatgaagagcgttcatccagactcg
cttcaaatctttaacgccatcagcggcacgccaaccagcgccaccatccacggcatcccc
agctcttcctctgtggtatga
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integrated database retrieval system
