Pseudoliparis swirei (Mariana hadal snailfish): 130209587
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Entry
130209587 CDS
T09868
Symbol
brd8b
Name
(RefSeq) bromodomain-containing protein 8 isoform X1
KO
K11321
bromodomain-containing protein 8
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130209587 (brd8b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130209587 (brd8b)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
130209587 (brd8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
PUF_NOP9
DLP_helical
Motif
Other DBs
NCBI-GeneID:
130209587
NCBI-ProteinID:
XP_056295312
LinkDB
All DBs
Position
19:4607846..4620565
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AA seq
787 aa
AA seq
DB search
MASGIGKHKIQNVGPTEPWSIREKLCLASSVMRSGDQNWVSVSRAIKPFSEPGRPPDWFS
QKHCASQYSELLEATEAPKRKRGEKGEVVETIEDVIVRRLTTERIEELKKLLRDTQEQYR
KLKKEVDLIQTGHMDSQLKELWTEITLKKTQAEEEAEQKRKATETAYQARQALKNTPKRQ
PSVTVRSPLGASPPAVDPLADSLVPATPMDTGAVVSNDTTTTTIITTTTTPPTTTTHSVA
QGVAAFLPATDAPGPGPKDGGVAAQVDDSPQKRLLTQKTTPPPSPLLSELLKKGSLIPAS
PSLVGEGDSIGSLTNGVQAATALPPGHEVITEVEADAAVKVELGEEAGLVEEDLVAVSYM
GDELDLATVGDIIAIIEEKVDDSVEALDAAAVEAALSLCEEAVSEGHTLPGPWETQELKA
SDPAPAVQDSSDPAPEPPDAAAAASAPSPAAAETQGHAEAEREQQLKGNCEGPEVTGSDV
ASDDGATGSEVTEEGAASGKEAAEATVKSEGEEWSQPEPNPPCLDSEDSSVSGKESKEVK
EEEAGSEGYPEEGMELKEECGEGEGPYLSEVERAASESEDGYGPPSQRYTADSLASSPAS
SSQLSTCGEDQEAVQAQKIWKKAIMLVWRAAANHRYASVFLQPVSDDIAPGYHSIVHRPM
DLSAIKKNIESGVIRTTAEFQRDIMLMFQNAVMYNSSDHDVYHMALEMQRDVLEHVQQFL
ATQLIMQTSESAISAKSLRGREGNRKPGEPAEKDSVPMASPAFLLSLFDGGTRGRRSAME
ADLKMKK
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggtatcggcaaacacaagatccagaatgtgggaccaacagagccctggtcc
atcagggagaaactatgcctggcctcctctgttatgaggagtggcgaccaaaactgggtg
tctgtaagtagagccatcaagcctttctcagagcccggccgtcctcctgactggttctcc
cagaagcactgtgcctcacaatactctgagctgctggaggccacagaagcacccaagcgt
aagcgtggtgagaagggcgaggtggtggaaaccattgaagatgtcatcgtgcgtaggctg
accaccgagaggatagaggagctgaaaaaactgctgcgagacacacaagagcagtacagg
aagttgaagaaggaggtggatctgatccagacgggtcacatggactcccagctgaaggag
ctgtggacagagatcacactaaagaagacgcaggctgaggaggaagcggaacagaagagg
aaagccacagaaacggcgtaccaagctcgccaggcgctgaaaaacacgcccaagcgtcag
cccagcgtcactgtccgctctcctctgggtgccagcccccccgccgtggaccctctggct
gactctttggtccccgcgacgcccatggatacaggcgctgtcgtctccaacgacaccacc
accaccaccatcatcaccaccaccaccaccccccccaccaccaccacccactcagtggcc
cagggggtcgcagcgtttctcccggcgacggacgctccaggcccgggacccaaagacgga
ggcgtggccgctcaagtagacgactcgccgcagaagaggctcctgacccagaagaccacg
cccccgccctcccctctgctgtcggagctgctgaagaaaggcagcctcatcccggccagc
cccagcctggttggggagggagactcgattggaagcctcaccaatggagttcaggcagcc
accgccttgccacctggccatgaggtcatcacagaggttgaagcggatgctgcggtgaag
gtggagctcggtgaagaggcggggttagtggaagaggacctcgtagcggtgtcctacatg
ggagacgagttggacctggcgacggtgggagacatcatcgccatcatagaggaaaaggtc
gacgactccgtggaggcgttggatgcagccgcagtggaagcggcgctctccttgtgcgaa
gaggccgtctcggagggacacaccctccccggcccctgggagacgcaggagctgaaggct
tcggacccggcgcccgccgtccaggactcctccgatcccgctccggagcctccggatgcg
gccgccgccgcgtcggccccgagtcccgcagccgcggagacgcagggtcacgcggaagcc
gagcgggagcaacagctcaaggggaactgcgagggacccgaagtaacaggaagtgatgtc
gcctcggacgacggcgcaacgggaagcgaggtgacggaggagggggcggcgtcggggaag
gaggccgccgaggcgacggtcaagagcgagggagaggagtggagccagccggagcccaac
ccaccgtgcctggactctgaggacagctctgtctctgggaaagagtccaaggaggtgaag
gaggaggaggcgggaagcgagggctacccagaagaagggatggagctgaaggaggagtgc
ggggagggggaggggccctacctgtcggaggtggagcgggcggccagcgagagtgaagac
ggctacggcccgccctctcagcgctacacggcggactccctggccagcagcccggcctcg
tcttcacagctctccacatgcggcgaggaccaggaggccgtgcaggcccagaagatctgg
aagaaagccatcatgctggtgtggagagccgcagccaaccacaggtacgccagcgtcttc
ctgcagccggtgtcggatgacatcgccccgggttaccacagcatcgtacacagacccatg
gacctgtcggccatcaagaagaacatcgagtccggcgtgatccgcaccacggccgagttc
cagcgcgacatcatgctgatgttccagaacgccgtcatgtacaactcgtcggaccacgac
gtgtaccacatggcgctggagatgcagcgcgacgtcctggagcacgtgcagcagttcctc
gccacgcagctcatcatgcagacgtcggagagcgccatctccgccaagagcctccgcggc
cgggaggggaaccgtaagccgggggagccggccgagaaggacagtgtcccaatggcctct
cctgctttccttctctctctctttgacgggggcactagaggtcgccggagtgccatggag
gccgacctcaaaatgaagaaatag
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