Pseudoliparis swirei (Mariana hadal snailfish): 130209610
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Entry
130209610 CDS
T09868
Symbol
ocrl
Name
(RefSeq) inositol polyphosphate 5-phosphatase OCRL
KO
K01099
inositol polyphosphate 5-phosphatase INPP5B/F [EC:
3.1.3.36
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00562
Inositol phosphate metabolism
pswi01100
Metabolic pathways
pswi04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
130209610 (ocrl)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
130209610 (ocrl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130209610 (ocrl)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
130209610 (ocrl)
Membrane trafficking [BR:
pswi04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
130209610 (ocrl)
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
130209610 (ocrl)
Rab GTPases and associated proteins
Rab associated proteins
130209610 (ocrl)
Protein recycling
Other Rab GTPase associated proteins
130209610 (ocrl)
Endosome - Golgi transport
Rab associated proteins
130209610 (ocrl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
OCRL-like_ASH
OCRL_clath_bd
RhoGAP
Exo_endo_phos
INPP5B_PH
HYDIN_VesB_CFA65-like_Ig
Ig-CFAP74_4th
Ig_CFAP65_4th
PapD-like
Motif
Other DBs
NCBI-GeneID:
130209610
NCBI-ProteinID:
XP_056295348
LinkDB
All DBs
Position
19:complement(19399682..19416629)
Genome browser
AA seq
982 aa
AA seq
DB search
MDSSLGISDDVCLATAKVQELRAGQKEPRLLSLIERRGEFILGVLATPDAVVSRPVPQLS
IPINGHFEIVREAEEALLINFSVASGVRIRIKGEKAPELLLEFQNDERTQTFLAQVQSAQ
QVESKLPKPKAMEPLGPTALRGHVPIPPQRANKTATSVGSGVNPPKSTNALPPNLNNSRS
TNQTNTDPVKSLASDFGFEDNFNHTLKVEEKKNHQNRIVAVREPPPVPPLPPRKASSTPS
NPLPPLPVSKDRAVSLQSKDNSKPDSFRSGYDRVDRPSSWCDSPTTNSMRQAMFSSEAGQ
REYLIKHRLGKREKEYVDIQSFRFFTGTWNVNGQAPDSSLEPWLCCDAEPPDIYALGFQE
LDLSTEAFFYMDSSKEHLWVEAMERSLHPKAKYKKVRIIRLVGMMLVVFVKKIHKNHIKE
VAAEHVGTGIMGKMGNKGGVAVRFVFHNTSFCIVNSHLAAHVEDFERRNQDYKDICARMT
FHLLDHPPLSIVKHEVVIWLGDLNYRLFMYNSAEVKQHISQNELKKLQEVDQLNIQRQTK
RAFTDFMEGEINFLPTYKYDPKTDRWDSSGKCRVPAWCDRILWRGKDVKQLKYRSHMELQ
TSDHKPVSALFVVGVKVANEQRHKKVFEEIVRAMDRMENDFLPSVTLNRREFTFGNVRFR
QLQKEPFQITNDGQVPCHFAFIPKLNDSQYCKPWLRAEPSDGFLEPNETLEIYLEVYVSK
DSVTLLNSGEDAIEDILVLHLDRGKDYFITISGNYLPSCFGTSLETLCRMKKPIREIPIT
KLIDLEEDSFMEKEKSKMSFLIVDGASTEDKPLKIPKEVWILVNHLFTKSCEQEDLFQTP
GLQEELQSIIECLDTSIPDSISGCNHSVAEALLIFVEALPEPVVCYELYQRCLDCAHDSR
LCKQLISQLPRAHRNVFRYLMAFLKELLKHSHNNNLTASLIATLFASLLVRPPPNLMGRQ
TPHERQKSIDFILGFLMAGDEE
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggattcctctttggggataagcgacgacgtgtgcttggcaacggcaaaagttcaggag
ctgagggctggccagaaggagcccagactactgtcactaattgagcgcaggggagagttt
atattgggtgttttggccacccctgatgctgttgtgtctcgtccagtgcctcagctgtct
atacccatcaatggtcattttgaaattgtgcgagaggctgaagaggctcttcttattaac
ttctcagtagcttccggagttaggatacgaatcaaaggagaaaaggctccagagctgctg
ttggaattccagaatgatgagcggactcagactttcttagcccaggtgcagagtgctcaa
caagttgaatccaaactcccgaagcccaaagcaatggagccccttggcccaacagccctg
agaggtcatgtccccatcccaccgcaaagagcaaacaagacggctacctctgtgggctct
ggagtcaacccaccaaaatctaccaatgcactgcctcccaacctcaacaatagcaggtca
acaaatcagactaacacagatccagttaaatcacttgcctcagactttggctttgaagac
aacttcaatcacactcttaaagtggaggaaaagaagaaccaccagaatcgcatagttgct
gtaagggagcctcctccggtcccccctctacctccacgcaaagcctcctccactccatcc
aatcctctgcctcctctaccagtctctaaagacagagcggtctccctacagtccaaagac
aactccaaaccagatagttttaggtcagggtatgaccgcgtggataggccatcgtcttgg
tgcgacagtcccaccaccaacagcatgaggcaggccatgttttccagcgaggcaggacaa
agagaatacctcatcaaacaccgcctgggcaagagggagaaggagtatgtggacatccag
tccttcaggtttttcacaggtacgtggaacgtgaacggccaagctccagacagcagcctg
gagccgtggctctgctgtgacgcagaacctcctgatatttatgctctgggttttcaagaa
ttggacttgagcactgaagctttcttctacatggactcgtccaaggaacatctttgggtg
gaagcaatggagaggagcttgcacccgaaagccaagtacaagaaggtccgaatcatacgt
cttgttgggatgatgcttgtggtttttgtgaaaaagattcacaagaatcatataaaagaa
gtggctgcagagcatgtggggaccggaatcatggggaaaatggggaacaaaggaggtgtg
gcagtgaggtttgttttccacaacactagcttctgcatcgtcaactcccatctagcagca
cacgtggaagattttgagcgccgcaaccaggactataaagacatctgtgcccgcatgacc
ttccacttactggaccacccccctctcagtatcgtcaagcatgaggtcgtgatctggctc
ggggatctaaactatcgtctgttcatgtacaattctgctgaggtcaaacagcacatttct
cagaatgagctaaaaaagcttcaggaggttgatcagttaaacatccagaggcagacaaag
agagccttcaccgacttcatggagggagagatcaacttcctccccacatacaagtacgac
cccaaaacggatcgatgggattcaagcgggaagtgccgtgtaccggcttggtgtgacaga
atcttatggagagggaaggatgtcaagcagctgaaatatcgaagtcacatggagctgcaa
actagtgaccacaaacccgtcagtgctctcttcgttgttggggttaaggtggcaaatgag
cagcgccacaaaaaggtgtttgaggagattgttcgggcgatggacagaatggagaatgat
ttccttccatccgtaactctgaacaggagagagtttacatttggtaatgtgagattccgg
cagcttcagaaggagccctttcaaataacaaacgacgggcaggtcccctgtcactttgcc
ttcatccccaaactcaatgactctcagtactgtaagccctggctccgcgccgagccaagc
gatggattcctagagccgaacgagacattggagatctatctggaggtgtatgtcagtaag
gactcggtcacgctactgaactctggagaggatgccatcgaggacattctggtgctccac
ctggaccgtggaaaagactacttcattaccatctctggcaactacctgcctagctgcttt
ggcacctcactggagactctgtgccggatgaagaagcccatcagagagatccccatcacc
aaactaattgacctggaagaggacagcttcatggaaaaggaaaagtcaaaaatgagtttc
ctgattgtggatggtgcaagtaccgaggacaaacctctgaagatccccaaagaagtctgg
attcttgtcaaccatctcttcaccaagtcctgtgagcaggaggacttgttccagacacca
ggactacaagaggagctgcagagcatcatcgagtgtctggacaccagcatcccagactcc
atctctggttgtaaccactctgttgctgaggctctgttgatcttcgtggaggccttgcca
gagcccgtggtgtgttatgaactctaccaacggtgcctggactgcgctcatgacagccgc
ctctgcaaacagctgatctcccagttgccccgagctcaccgcaacgtgtttcgctactta
atggcttttctgaaggagcttctgaagcactcgcacaacaacaacctaacggccagcctc
atagctacactctttgccagcctcctcgtccgtccccctcccaacctgatgggcaggcag
acgccacacgaacgtcagaaatccatcgacttcatcctgggtttcctgatggcgggagac
gaggaatga
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