Pseudoliparis swirei (Mariana hadal snailfish): 130209690
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Entry
130209690 CDS
T09868
Symbol
ehd1a
Name
(RefSeq) EH domain-containing protein 1a
KO
K12483
EH domain-containing protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130209690 (ehd1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130209690 (ehd1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pswi04147
]
130209690 (ehd1a)
Membrane trafficking [BR:
pswi04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
130209690 (ehd1a)
Exosome [BR:
pswi04147
]
Exosomal proteins
Proteins found in most exosomes
130209690 (ehd1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5600
Dynamin_N
EH
EHD_N
MMR_HSR1
GTP_EFTU
EF-hand_1
EF-hand_7
Roc
AAA_16
AAA_22
AAA_28
Gtr1_RagA
TsaE
AAA_7
AIG1
Motif
Other DBs
NCBI-GeneID:
130209690
NCBI-ProteinID:
XP_056295446
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All DBs
Position
19:complement(17379946..17394756)
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AA seq
532 aa
AA seq
DB search
MFRKNTKKDPEMFQNVSEGLRRLYRTKLFPLEDTYLFHDFHSPALEDADFDNKPMVLLVG
QYSTGKTTFIRHLMEQDFPGMRIGPEPTTDSFIAVMHGEQEGVIPGNALVVDPKKPFRKL
NAFGNAFLNRFMCAQMPNAVLESISIIDTPGILSGEKQRISRGYDFAAVLEWFAERVDRI
ILLFDAHKLDISDEFSEVIRALKNHEDKMRVVLNKADQISTQQLMRVYGALMWSLGKIIN
TPEVVRVYIGSFWAQPLLVPDNRKLFEAEEQDLFLDIQSLPRNAALRKLNDLIKRARLAK
VQAYIISSLKKDMPSVFGKESKKKELIANLGEIYHKIEKEHQISPGDFPNITKMQDQLNA
QDFTKFAPLKPKLLEAVEDMLSNDIARLMAMVRQEEAAMPSQSVKGGAFEGTMNGPFGHG
YGEGASEGIDELEWVVGRDKPTYDEIFYTLSPINGKVSGAAAKKEMLKSKLPNTVLGKIW
KLADVDRDGLLDDDEFALANHLIKVKLEGHELPPSLPVHLIPPSKRGLPVED
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgttcagaaagaacacgaagaaggacccggagatgtttcagaacgtgtcggaggggctg
cgacgtctctaccggaccaagctgttccctctggaggacacgtatctgttccacgacttc
cactcccctgcgctcgaggatgccgacttcgacaacaaacccatggtgctgctggtgggt
cagtactccaccgggaagaccaccttcatccggcacctcatggagcaggacttccccggt
atgcggattggccccgagccgacaacggactcgttcatcgcggtgatgcacggcgaacag
gagggggtgatccccggtaacgcgctggtggtcgaccccaagaagcccttccgcaaactc
aacgccttcggcaacgcttttctgaacaggttcatgtgtgcccagatgcctaacgccgtc
ctggagagcatcagtatcatcgatactcctggaattctgtctggggagaagcagaggata
agcagaggttacgacttcgccgcagtgctggagtggtttgcagagcgcgtcgaccgcatc
atcctcctgttcgacgctcacaagctggacatctcggacgagttctccgaggtcatccga
gcgctgaagaaccacgaggacaaaatgcgagtggtcctgaacaaggcggaccagatcagc
acccagcagctgatgagggtttacggagctctcatgtggtctttgggaaaaatcatcaac
acacctgaggtggtgcgtgtgtacattgggtctttctgggcccagcccttgttggtccca
gacaacaggaagttgtttgaagcagaggagcaggacctgttcttggacatccagtcgttg
ccacgtaacgcagctctacgcaaactcaatgacctcatcaaacgagcacgactcgccaag
gtacaggcctatattatcagctctctgaaaaaagacatgccgagtgtgtttgggaaggaa
tccaagaagaaggagctgatcgccaacctgggagaaatctaccataagattgagaaggag
caccagatctcacctggagatttccccaacattaccaagatgcaggaccaactgaatgcc
caggacttcactaagttcgcaccactgaagcccaagctgctggaggctgtggaggacatg
ctgtccaacgacatcgcccgtcttatggccatggtgcgccaggaagaggccgccatgccc
agccagtccgtcaagggtggagcctttgagggaaccatgaatggaccctttggtcatggc
tatggagagggtgccagcgaaggcatcgatgagctggagtgggtggtgggtcgtgataag
ccgacatatgatgagatcttctacaccctttctcccatcaatggcaaagtgtccggcgct
gcagccaagaaggagatgctgaagtccaagctgcccaacacagtcctggggaagatctgg
aagctagcagacgtggatagagatggcctcctcgacgacgacgagttcgccctggccaac
cacctgatcaaagtgaagctggagggccacgagctgccgccctcgctccctgtacacctg
attcccccgtccaaacgcgggttacccgtggaggactag
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