Pseudoliparis swirei (Mariana hadal snailfish): 130209695
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Entry
130209695 CDS
T09868
Symbol
clcf1
Name
(RefSeq) uncharacterized protein clcf1 isoform X1
KO
K05421
cardiotrophin-like cytokine factor 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
130209695 (clcf1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pswi04052
]
130209695 (clcf1)
Cytokines and neuropeptides [BR:
pswi04052
]
Cytokines
CSF and other factors
130209695 (clcf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CNTF
EPO_TPO
Motif
Other DBs
NCBI-GeneID:
130209695
NCBI-ProteinID:
XP_056295452
LinkDB
All DBs
Position
19:complement(15916278..15928518)
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AA seq
503 aa
AA seq
DB search
MKMLCGVHQRQLILLLAAAMATALDSSHNLASERSSIESTYELTKYLEYQLKEIKDIYLT
YLGPPFNEKDFSPPRPNSTSLTLPSAATRLELWHGLENQARLSQNQKAYSFLLAAVRELA
RSTLCPSLKISLLHFCTGLDGLLGSISALMTTLGYALPPPSAYVASAARELQFPLRGVGA
DRPAPLMSQSLYRSRAGTRTESAQRNNQRRSGKTVVRGEREDGVRVDLVEKRRGRDGRRA
DTTATGGGSGGSREKGRGERGRRGRREEPERRKWSPSEDERVGEEEDEELEREVGEDGWR
RRRLLSISEDGEGKESQPEPWGEVSYPGTDSSSSLGLANIQTHNNQYSYNMNSRHTDTLR
EEDDFIVEARRGLTVEEEKQTYMEASYSTLHHQRRPARSLLTPTLQPPLSTLSLLYQFGA
GEEHTLLSQPVPLSLRRGTSLLSRPLNPLLSSAASASSSLLSVRPTMNDFARKVEGFWIL
RELQSWLWRSAKDFNRLKKRLRG
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgctttgcggagtgcatcaacgccaactcatcctgctattggctgctgccatg
gcgacggccctggattcttcacacaacctggctagcgagaggagttcgatagaaagcacg
tacgagctgaccaaatacctggagtatcagctcaaggaaatcaaagacatatatctgaca
tacctcggccctccattcaacgagaaagacttctcccctcctcgacccaacagtacctct
ctgaccctgcccagcgccgccacccgcctggagctgtggcacggcctggagaaccaagct
cggctctcccagaaccagaaggcctactccttcctgctggcagcagtcagggagttggcc
cgctccaccctctgcccctccctcaagatctccctgttgcacttttgcacaggcctagat
gggctactgggctctatatcagcgctgatgaccaccctcggttatgcacttcctcctcca
tctgcttacgtggcgagtgccgccagagagctgcagttccctttgaggggggtaggggcc
gaccgacccgctccactgatgagccagagcctttacaggtccagagccgggaccaggaca
gagtccgctcagcgtaacaaccaaagacggagcgggaagacggtggtcagaggagagagg
gaggacggtgtcagagtagacctggtggagaaaagaagagggagagacgggaggagagcg
gacacgaccgcaactggaggagggagtggcggatcgagggagaagggaagaggagaaaga
gggaggagagggagaagggaagagccggagagacggaaatggtctcccagtgaagacgag
agagtaggggaggaggaagatgaggagctggagcgagaagtaggtgaggacggatggagg
aggagaaggttgttgagtatcagcgaggatggagaggggaaggaaagtcagcctgaaccc
tggggagaagtgtcgtacccgggcacagacagctccagctcccttggactagcaaacatc
caaacccacaacaatcaatacagctacaacatgaactcacgtcacacggacactctcaga
gaagaagatgactttattgtggaggcacgcagagggttaacggtggaggaggagaagcaa
acttacatggaggcttcttactccactttgcatcatcagcgtcggcctgctcgctccctc
ctcactcccaccctccaacctcctctgtccaccctctccttgctctaccagtttggagca
ggtgaggagcacaccctcctctcccagccggtgcctctgtctttacgaaggggcacctcc
ctcctttctcgtcctctaaatccgctcctttcctcagccgcctctgcctcctcctcgctg
ttgtcggtgcggccgacaatgaacgactttgccaggaaagtggaggggttttggatattg
agggagctgcagagttggctgtggcggtcggcgaaggactttaaccgcctaaagaagaga
ctcagaggctga
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