Pseudoliparis swirei (Mariana hadal snailfish): 130209700
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Entry
130209700 CDS
T09868
Name
(RefSeq) cohesin subunit SA-1
KO
K06671
cohesin complex subunit SA-1/2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130209700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130209700
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
130209700
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd1
HEAT_2
DHR-2_Lobe_C
Motif
Other DBs
NCBI-GeneID:
130209700
NCBI-ProteinID:
XP_056295460
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All DBs
Position
19:complement(21803615..21824964)
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AA seq
1214 aa
AA seq
DB search
MESGDSLLDSFEEVDDFSDSGSDYEVTLKATKRRKQAVTGPRPPKIPRYKAALRVSTSSS
TPNPSLPDSSLQQASRRTSSQASPRPVTRNNEDNRCISAENIYDAVRSGKSAMVTVVDEW
LDSYKQSREAGLLVLINFIVQSCGCKGLVSREMLDSMENAEIIGTLTKEFNEDSVNYPLC
TPGPELKHFKAGLCEFVRVLVRSCRNSLIYDEYLFSSLLALLTGLSDSQVRAFRHTSTLI
AMKLMTGLVEVAALSSVQLQTSQRQYDMENGKEAHYRAPGRLEELQATISQLRENREELA
SMMNVTFRGVFVHRFRDRLPEIRATCIEELGMWLKTNPEDFLNDGCLKYLGWTLHDKQSP
VRLQCVRALQSLYQEKEFIGRLELFTSRFKERILSMVLDKDPGVAVEVVNLLLLIQQRTE
EGLGEEECGHIYPLVYATNRAVASVAGVFLFNKLKSVIASDNQENEKMGNAAFFQMLISF
FIQSEFHEHGAYLVDSLWSVARSELRDWETMTTLLLQESGLMYEEEGSLIELMMCAIRQA
AEATPPVGRTQGKKILGMKNKKVQEQDRRRITTHFIPLLPQLLAKYSADAEKVSLLLKAP
LYFSLEMYSSSPRLEKHLDLLLSQVCCIIEKHTEVPVLEACSNLVSILCVDCYTFSSRTH
LAFSQMMDSLTECLNAYLSDLLQGTADDDDVYSAATALKKIAALSSAKDPTAWKLFDSCL
ELLKSKMESREFDKELMVSALKCAAFSLMWAKVNAVNSTPAEVELKRLKKEMRSFCKVCE
TCLSLDQTEIRDQAFVLLCDLLLLYSASSAHVEPALQTLVHLPSDSLRSELAAFLLDYVF
SDTEDDELDDEVEEVMKITLLQRKRNQLAGYCKLVIYGVLDLTAATNVFKHYSKYFKDFG
DIIKETVSKSKVINPIQSAKTVCLSLQQLFSEMLTEEHSRQDLGEIRDLAKRLAMSFGIN
LNRVRKPLVALHVDGVRFAFRDPPEDEEPQSNVAFLEVLSEFSFKLLPQDRAELAAFLKS
VCPGNALSWPPVRLYQRSLEGRTSAKAREQEEEEGDAVFSHDAPLAKRKRTTPQHSGPGS
WLDSSIRSSFATPAFTSTAQKQTAKPLASRDTESETGSVLTEPESEDDFSVGSKMRKVKP
IRRRQLSSSQTGHSLNQRDLNSQLTLLSLIEDDSEEREEEPEIENYESDSDPDSAYTLPS
TRHTSISVIDELFD
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtggagactccctattggacagttttgaggaggtggatgacttctcagattct
ggcagtgactatgaagtcacgcttaaagccacaaagcggagaaaacaggcagtaaccgga
cctcggccacccaagatacctaggtataaagctgcattgagggtgtccacctccagcagc
acccccaaccccagtcttccagactcctccctgcagcaggcctcccgaaggacatccagt
caggcctctcctagacctgtgacaagaaacaacgaggataaccggtgcatcagtgcagag
aatatctatgatgctgtccgttctggaaagagtgccatggtgacggtggtggacgagtgg
ctggacagctacaagcaaagccgagaggcggggctgctggtgctcatcaacttcattgtt
cagtcctgtggatgcaaaggtttggttagcagagagatgttggacagcatggagaatgct
gagatcatcggcacactcaccaaagagttcaatgaggattcagtgaactaccctttgtgc
actccaggccccgagctaaagcatttcaaagccggcctgtgtgagtttgttcgggtcctc
gtgagatcgtgtcggaatagcctcatttatgatgagtacctcttctcctctctgctggct
ctgctcaccggcctctctgactcccaggtcagagccttccgacacaccagtaccctgatt
gccatgaagttgatgactgggctggtggaggtagctgcgttatcgtctgttcagctgcag
accagccaacggcaatacgatatggagaacggcaaggaggcgcattaccgagcccctggc
agactggaggagctgcaggccaccatcagtcagctccgggagaacagagaggagttagcc
tccatgatgaacgtcacgttccgcggtgtgtttgtgcaccgttttcgtgaccggctgcct
gagattcgggctacgtgtattgaggagctgggcatgtggctgaaaacgaaccctgaagac
ttcctgaatgatggatgtcttaaatacctgggctggactctgcatgacaagcaaagtcca
gtgcgtctgcagtgtgtgcgtgccctgcagagtctgtaccaggagaaggaattcattggc
cgcctggagcttttcaccagcagatttaaagagagaattctcagcatggtgctggacaag
gacccaggggtggcagtggaagtggtcaatctgttgctgctgatccaacagaggacagag
gaaggtctgggagaggaggagtgcggtcacatctatcccctggtttacgctacaaacaga
gccgtggcttctgtagccggcgtcttcctctttaacaagctgaaaagtgtgattgccagt
gacaatcaggagaatgaaaaaatgggaaatgcagccttctttcaaatgctcatctccttc
ttcatccagagtgagttccatgagcacggggcatacctggtggatagtctgtggagtgtg
gcaagatctgagctgagagactgggagacgatgacaacgttgctgctacaggagtctggt
ctgatgtatgaggaggaggggagtctcatagagctgatgatgtgtgccatcagacaggca
gcagaggcaaccccacctgttgggagaactcagggcaagaagatcctgggcatgaagaat
aagaaggtccaggaacaagacagaagacgtatcaccacacacttcattccattactgcca
cagctgcttgccaagtactcagcagatgcagagaaggtgagcctccttctcaaagctccc
ctatacttttctctggagatgtacagcagcagtccacgactggagaagcatctggaccta
ctgctatctcaggtatgttgtattattgagaagcacacggaggtccccgtgctcgaggct
tgcagcaatctggtcagcattctttgcgtcgactgctacaccttctcctctcgcacacat
ctggcattcagccagatgatggacagcctgactgagtgcctcaacgcctacttgagtgac
ctgctgcagggtactgccgatgacgatgatgtatacagtgcagctactgctttgaaaaag
attgcagccctgagcagtgccaaggacccgacggcctggaagctgttcgactcctgtctg
gagcttctgaagagcaagatggagtccagagagttcgacaaggagctcatggtgtcggcc
ctgaaatgtgctgcctttagcctgatgtgggctaaagtgaatgcagttaactccacacca
gctgaggtggaattgaagcgtctgaagaaggagatgcgttcgttctgcaaagtttgtgaa
acgtgtctgtctctggaccagactgagatcagagatcaggcgtttgtgctgctgtgtgac
ttgctgctcttgtacagtgcgagttcagcccacgttgaacccgccctccaaacgctggtc
cacctgccgtctgattccctgcgttctgagctggctgctttcctcctggactacgtcttc
tcagacactgaagatgatgagcttgatgatgaggttgaggaggtgatgaagataactctt
cttcagaggaagcgcaaccagctggctggctactgtaaactagtcatctacggggtgctg
gacctcaccgctgccaccaacgtcttcaagcactacagcaagtactttaaagactttggc
gacatcattaaagagactgtgagcaagagcaaggtcatcaatcccatacagagcgccaag
accgtctgtctgagtctgcagcagctgttctcagagatgcttacggaggaacacagcagg
caggatctcggtgagatcagagacttggccaagaggcttgccatgagctttggcatcaat
ctcaaccgtgtccgcaaaccactggtggccctgcatgtggatggtgtacgttttgcattt
cgggacccaccagaggacgaagagccgcaatcgaacgtggctttcctggaggtcctcagc
gagttcagtttcaagctgctgccacaggaccgcgctgagttggcagcctttctgaagtcg
gtgtgtcctggtaacgccctctcctggccgccagtcagactgtatcaacgttccttggag
ggccgcacctctgctaaagccagagaacaggaggaggaggagggcgatgctgtcttctct
catgatgcccctctagctaaacgcaagaggacaactcctcagcattcaggccccgggtcc
tggttggacagcagtatccgaagcagctttgccacgccagccttcacctccacggcccag
aaacagacggccaagccgctggcctccagagacactgagtctgagaccggcagcgtctta
actgagccggagtcagaggacgacttctccgtagggtccaaaatgcgaaaggtgaagccc
atcagacgacgtcagctctcctccagccagaccggtcactctttgaaccagcgggacctg
aactcccagctcaccttactatctctgattgaggacgacagtgaagaaagagaagaggag
cctgagattgagaattacgaaagtgactccgaccctgattctgcatacacactgccttcc
acccgacacacgtccatcagtgtcatcgatgagctctttgactga
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