Pseudoliparis swirei (Mariana hadal snailfish): 130209706
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Entry
130209706 CDS
T09868
Name
(RefSeq) high affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
130209706
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130209706
Transporters [BR:
pswi02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
130209706
SSDB
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Motif
Pfam:
SSF
Glucan_synthase
Motif
Other DBs
NCBI-GeneID:
130209706
NCBI-ProteinID:
XP_056295468
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Position
19:17344943..17357398
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AA seq
555 aa
AA seq
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MSLNVPGLVLMVLFYLLVLGTGIWAAMKTKRLQKSIQGDQTEITLLGNRGISLAVGVFTM
TATFVGGGFIVGLTEVVYNPTMGLTWAVMPITSSLSFILGGLFFAKKMRDKRYITMMDPF
QIKYGNGISAVLSLALLLSDIIWVTGTLIGLGATMNVILDLPYHVCIWISASVAILYTLL
GGLYSVAYTDIIQLSLIFISLWLCVPFIFMNPHSTDITKTAFNFTYQAPWIGSVEKEKVW
RWIDNFLLLALGNLGYQDFHQRTLSAASSATARLTCFIAAPFMFILGIPSILIGAMAAST
DWNTTAYGSPSPYERGEASQVLPIALQHLTPHYISVIGIAAIAAAVMSSTDSALLSGASI
FTSNIYRNILRTTASDRELQWVIRATVVLVGLAGTLLTLVHNSIMFFWILGSSITYTMMF
PQLVCVLFFPISNGYGSIMGLIAGVSLRVLSGEPTIGLPVVLHFPGCTLENGVYVQHSPV
QTICMLSNLFVTLLFSFLASLLFNRGLVPERWDIFKVKTPKPPNKIMLVSNGTTKTDEEK
PEVHNELELMLTTNQ
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgaacgtcccaggactcgtgctgatggtgctcttctacctgctggtgctgggc
accggtatctgggccgccatgaagaccaagcggctgcagaagagcatccagggtgaccaa
acggagatcactctgctgggcaaccgggggatcagcctggcagtgggagtcttcactatg
acagctacatttgttggagggggcttcattgttggtctgacagaggtcgtgtacaatcca
actatgggactgacgtgggcggtcatgccgataacatccagcctgtctttcattcttggt
ggacttttcttcgccaagaagatgagagacaaaagatatataacgatgatggacccgttc
cagatcaagtatggaaatggaataagtgcagttctgtccctggcactgctgttatccgac
ataatctgggtcacaggaactcttatcggtttaggtgcaacaatgaatgtgatcctggat
ttgccctatcatgtctgcatttggatctctgcctcagtagccatcctttacacactgctg
ggaggtctctactctgtcgcctacacagacatcatacagttaagcctcatattcatcagt
ttgtggttatgtgtccccttcatcttcatgaacccccattcaactgacatcaccaagact
gcgtttaacttcacctaccaggccccctggattggttcggtggaaaaggaaaaggtgtgg
aggtggattgataatttcttattattggcattaggtaaccttggataccaggacttccat
cagaggacgctgtcagctgcctcgtcagctacagccaggttaacctgttttattgcagct
cccttcatgttcatactagggatcccatccattttgatcggggcaatggccgcatccaca
gattggaacacaaccgcatacggctctccgagcccatacgagcgtggagaggccagtcag
gttctgcccattgctctgcagcacctcaccccacactacatctccgtcatcggtatcgca
gctatagcagctgcagtgatgtcatcgacagactcggctttattgtccggtgcctccatc
ttcacatccaatatctataggaacatactgaggactacagcatcagatagggagctccag
tgggtgatccgtgccaccgtggtgttggtgggcttagctggtaccctgctcaccctcgta
cacaacagcattatgtttttctggatcctgggctcaagcataacctacaccatgatgttc
ccccaactcgtctgcgtcctcttctttcccatctccaatggctacggctccatcatgggc
ttgattgctggcgtgtcgctgagagtactgagcggcgagccaacaatagggttgcccgtt
gttctccacttcccaggttgcacacttgagaacggtgtttacgtccagcactctcctgtt
cagacgatctgcatgttgtccaacttatttgttactttattgttctctttcctcgcttca
cttctcttcaatagaggactggttcctgagaggtgggacatatttaaagtgaaaaccccc
aaaccgccaaataaaataatgttagtgagcaatggcaccaccaaaacagacgaggagaaa
cctgaggttcataatgagcttgaattaatgttgaccacaaatcagtag
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