Pseudoliparis swirei (Mariana hadal snailfish): 130209727
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Entry
130209727 CDS
T09868
Symbol
dcps
Name
(RefSeq) m7GpppX diphosphatase
KO
K12584
m7GpppX diphosphatase [EC:
3.6.1.59
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130209727 (dcps)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130209727 (dcps)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.59 5'-(N7-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase
130209727 (dcps)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
130209727 (dcps)
3'-5' decay
Other 3'-5' decay factors
130209727 (dcps)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
DcpS
Motif
Other DBs
NCBI-GeneID:
130209727
NCBI-ProteinID:
XP_056295506
LinkDB
All DBs
Position
19:complement(5228346..5230425)
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AA seq
331 aa
AA seq
DB search
MADTAAKRETDSVGTDELSQRVKRARVDDENGDGGVGNDPESENILSEFKTSAVLSDSAR
EKTIFIHGKLGDQEAVVILEKTPIREDTLAELFTGSKLKLEMKNDIYSTYQLLAPPKFNE
IKTTVVCPATEKHVKKYQRQESSLVEETGEDYKSITLPYIQKQSFSVQWVHNILDKKAET
ERIVFEDPDPDVGFLLLPDLKWDQKQVDDLYLIAIVNQRDIKSLRDLTSEHLPLLQNIFQ
KGKEAILQRYSLAASKLRVYLHYQPSYYHLHVHFTKLGYQAPGCGVERAHLLADVIQNLQ
ADPEYYKTRTLYFPLRAEDGLLGNFQEAGRL
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaccgcggcaaaacgagaaacggatagtgttggaaccgatgaattatctcag
agagtcaagagggcgagagttgacgatgagaatggcgacggaggagttggaaacgatcca
gaatctgaaaatattctgtccgaatttaaaacctcggccgttttgagtgattctgcccgg
gagaagaccatcttcatccatggaaagctcggcgatcaggaggctgtggtcatcctggag
aagacgcctatcagagaggacaccctggctgagctgttcactgggtccaagctgaagctg
gagatgaagaatgacatctacagcacgtatcagttgctggctccccctaaattcaatgag
atcaagaccacggtggtgtgtccggccacggagaagcatgtcaagaaataccagcgacag
gagagttccctggtggaggagacgggggaggactacaagtccatcactttgccctacatt
cagaagcagagtttcagcgtgcagtgggtccacaacatcctggacaagaaggctgagacg
gagaggatagtctttgaagatccagacccagacgttggctttctcctcctcccagatttg
aaatgggaccagaaacaggttgacgatttgtacctgattgccatagtaaatcagagagac
atcaagagtctcagagacctgacgtcggagcatctaccgctgctgcagaacatcttccag
aaaggaaaggaggccatcctgcagcgctacagccttgcggccagtaagctgagagtctac
ctgcactaccagccgtcctactaccacctccacgtccacttcaccaagctgggctaccag
gcgccgggctgcggcgtggagcgggcgcacctcctcgcggacgtcatccaaaacctccag
gccgaccccgagtactacaaaacccggaccctgtacttccccctgagggcggaggacgga
ctgcttggcaactttcaggaggcggggaggctgtga
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