Pseudoliparis swirei (Mariana hadal snailfish): 130209733
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Entry
130209733 CDS
T09868
Symbol
canx
Name
(RefSeq) calnexin isoform X1
KO
K08054
calnexin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04141
Protein processing in endoplasmic reticulum
pswi04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130209733 (canx)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130209733 (canx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pswi03110
]
130209733 (canx)
04131 Membrane trafficking [BR:
pswi04131
]
130209733 (canx)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pswi04091
]
130209733 (canx)
Chaperones and folding catalysts [BR:
pswi03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
130209733 (canx)
Membrane trafficking [BR:
pswi04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
130209733 (canx)
Autophagy
ER-phagy
Other ER-phagy associated proteins
130209733 (canx)
Lectins [BR:
pswi04091
]
L-type lectins
130209733 (canx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
PFF1_TM
Neur_chan_memb
SieB
Motif
Other DBs
NCBI-GeneID:
130209733
NCBI-ProteinID:
XP_056295517
LinkDB
All DBs
Position
19:27996380..28009086
Genome browser
AA seq
662 aa
AA seq
DB search
MDQKFGLFFLLASGLLVLLSLSSVSRAEGAMEDDVLGDYVDVEDELELSLPGAEEGELEG
EQEEAPPIPKAPPIPKVTYKAPEPMGEHFIAESFDRGTLDGWVLSIAKKEDADEDIAKYD
GKWAVEDMKDSKLPGDKGLVLKSRAKHHAISAQLLRTFTFDTKPLIVQYEVNFQNGIDCG
GAYVKLLSQTADLDLDQFVDKTPYTIMFGPDKCGEEYKLHFIFRHKNPKTGEYEEKHAKK
PDSDLRTYYTDKKTHLYTLVLNPDNTFEVLVDQTQVNSGSLLTDMSPAINPAAEIEDPED
QKPEDWDERPKIQDPAAAKPEDWDEDAPSQVPDEDAVKPDGWLDEEPEYIGDPEALKPED
WDQDMDGEWEAPQVPNPLCESAPGCGSWKRPVVDNPNHKGKWKPAMIDNPNYQGVWKPRK
ISNPAFFEDLQPFRMTPFSAVGLELWSMTADIFFDNFFITDDRATADRWAADGWGLKKAA
EGAADPGLATQMLSAAEERPWLWVVYVLTVALPLVLIIVFCCTGKKKSPETPAAEYKKTD
EAQPDVKEPEAEEPEAKEAKEAEEPEAKEAKEAEEPEAPEAKEAKEPEEEEAEEEAEEEA
EEEAEEEAEKSSPAAEKSDADESPAENEEEAEKEKEATGDEKSSAEDDILRRSPRNRKVR
KD
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggatcagaagtttgggttgttcttcctcctggcatcgggcctcctcgtcctcctcagc
ttgtcctccgtctctcgggccgagggcgccatggaggacgacgttctgggcgactacgtg
gacgtggaggacgagctggagctgagtctccccggagcggaggagggggagctggagggg
gagcaggaggaggcgccccccatccccaaggccccgccgatacccaaggtgacctacaag
gctccggagcccatgggggaacacttcatcgcagagtccttcgaccgcgggacgctggac
gggtgggttctgtccatcgccaaaaaggaagacgctgacgaagacatcgccaagtacgac
ggtaaatgggcggtggaggacatgaaggacagcaagctccccggagataaaggtctggtc
ctgaagtctcgggccaaacatcacgccatctcggctcagctgctgcgaactttcaccttc
gacaccaagccgctcatcgtccagtacgaggtgaacttccagaacggcatcgactgcggc
ggcgcctacgtgaagctgctgtctcagaccgccgacctcgacctggaccagttcgtggac
aagactccgtacaccatcatgttcggacctgataaatgtggagaagaatacaaacttcac
ttcatcttcagacacaagaaccccaaaacaggagagtacgaagaaaaacacgccaagaaa
cccgactctgacctgaggacgtactacaccgacaagaagactcacctgtacacactggtg
ttgaaccctgacaacaccttcgaggtgctggtggaccagacgcaggtgaacagcggcagc
ctcctgaccgacatgtcgcccgccatcaacccggccgccgagatcgaggaccccgaggac
cagaagcccgaggactgggacgagaggcccaagatccaggacccggccgccgccaagccc
gaggactgggacgaggacgccccctctcaggttccagatgaagacgcggtgaaacccgac
ggctggctggacgaggagcccgagtacatcggagaccccgaagccctgaagccagaagac
tgggaccaggacatggacggcgagtgggaggccccccaggtgcccaacccgctctgcgag
agcgcccccggctgcggctcctggaagcgccccgtcgtcgacaaccccaaccacaagggc
aagtggaagccggccatgatcgacaaccccaactaccagggcgtctggaagccgaggaag
atctccaacccggcgttcttcgaggacctgcagccgttccgcatgacgccgttcagcgcc
gtggggctggagctctggtccatgaccgccgacatcttcttcgacaacttcttcatcacc
gacgaccgcgccaccgccgaccgctgggccgccgacggctggggcctgaagaaggccgcc
gagggcgccgccgaccccggtttggcgactcagatgttgagcgccgctgaggagcgcccg
tggctctgggtcgtctacgtgctcaccgtggctctgccgctcgtcctcatcatcgtcttc
tgctgcaccggcaagaagaagagcccggagacgccggcagccgagtacaagaagaccgac
gaagctcagcccgacgtgaaggagcctgaggctgaggagcctgaggctaaggaggctaag
gaggctgaggagcctgaggctaaggaggctaaggaggctgaggagcctgaggcgcctgag
gctaaggaggctaaggagcctgaggaggaggaggctgaggaggaggctgaggaggaggct
gaggaggaggctgaggaggaggctgagaagagcagtccagctgcagagaagagcgacgca
gacgagagtcctgcagagaacgaggaggaggcggagaaggagaaggaggcgacgggcgac
gagaagtcgtctgcagaggacgacattctgaggagatctcccaggaacaggaaggtcaga
aaggactga
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