Pseudoliparis swirei (Mariana hadal snailfish): 130209752
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Entry
130209752 CDS
T09868
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 4-like isoform X1
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04114
Oocyte meiosis
pswi04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
130209752
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
130209752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130209752
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
130209752
Factors involved in mRNA localization
Trans-acting binding proteins
130209752
mRNA cycle factors
P-body specific factors
130209752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_7
CEBP_ZZ
RRM_1
zf-U1
Motif
Other DBs
NCBI-GeneID:
130209752
NCBI-ProteinID:
XP_056295540
LinkDB
All DBs
Position
19:complement(1736935..1749358)
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AA seq
778 aa
AA seq
DB search
MFLNVSAAAVTRAEPPRGLRRFEHGHGDEEVTAGGTERDERINRIPPHLQPQHPHHPSNP
PSPPSFVNNTCATNGGSAWLFPVAQHGNMQDEILESDKSKALDLQDMQDKSQLQAQPQAL
SPGHQQQQQEAAGGLGELEGALLEDGQLEKGSLESSGGKEKLRMDSPVLSGFDYQDGLGM
GTSCTQSTSSSSSLTSFNNWSPAVPSAQSPVVGEDVGGFFGPTGSNSNGPPLLFQNFSHH
AAPDFGAGGSFSPQIGPVSQHHPPAPHPQHYHPHGQGVPQQHRRSPASPHPAQPSFPPHP
HRTGPFTQLPHLAPAQSKPPSPWGSYQSPSTPTSTSWSPGGYSGWGGTQGVREYRRGVGG
GGGMPGLNSISPLKKSFPNNQVPSQKFPRNSSGFNHKGWVEDGMSRSDSVYPFQVSASQQ
ERTRSFDGFSMHSLENSLIDIMRAEQDSLKGRYSFSHQAGDGPLPMNARSYGRRRGHSSL
FPMEDERSFGEDESGEQGLTGLGSAHCFPHLNGERVERYSRKVFVGGLPPDIDEDEITAS
FRRFGHLFVDWPHKAESKSYFPPKGYAFLLFQDESSVQALIDACIQEDGKLYLCVSSPTI
KDKPVQIRPWNLNDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAG
IDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGEIDKRVEVKPYVLDDQLCDECQ
GTRCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAGREFHKPLVKEGGDRPRHISFRWN
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgttcctcaacgtctccgctgcggctgttacccgagcggagccaccccgaggtctgcgg
cgctttgaacacggtcacggagacgaggaggtcaccgccgggggaacggaacgagacgag
aggattaatcggatccctcctcacctccagccccagcaccctcaccacccctccaacccc
cccagccccccttccttcgtaaacaacacctgcgccaccaatgggggcagcgcctggctg
ttccccgtagcccaacacggcaacatgcaagatgagatcctcgagtcggacaagtccaag
gccttggacctccaggacatgcaggacaagtctcagctccaggcccagcctcaggccctg
tccccgggccaccagcagcagcagcaggaggcggcgggaggcctcggagagctcgaggga
gctctcctcgaagacggccagttggagaagggctctttggagagcagtggcgggaaggag
aagctgaggatggattcccccgtgctgagcgggtttgactaccaggacggcctggggatg
ggtaccagctgcacacagtccacctcctcctcgtcctcactcaccagcttcaacaactgg
tcccccgcggtgccgtccgcccagtctccggtggtcggcgaggacgtcggagggttcttc
ggcccgaccggctccaactccaacggacccccgctgctgttccagaacttctcccaccac
gccgcgcccgacttcggcgccggaggtagcttctccccgcagatcggccccgtgtcgcag
caccacccgcccgcgccccacccccagcactaccacccccacggccagggagtcccccag
cagcaccgccgctccccggccagccctcacccggcccagccctccttcccgccgcacccc
caccgcaccgggccgttcacccagctgccccacctcgcgcccgcccagagcaaacccccg
tcaccctggggaagctaccagagcccctccactcccacctccacctcctggagccccggt
gggtacagcggctgggggggaacgcagggcgtccgggagtacaggcgcggggtcggcggc
ggcggcggcatgccgggtctcaactccatctccccgctgaagaagtcgttccccaacaat
caggttccgtctcagaagttccccaggaacagctccggtttcaatcacaagggctgggtg
gaggacggcatgagccgcagcgacagcgtctaccctttccaggtgagcgcatcgcagcag
gagagaactcggtcctttgatgggttcagtatgcattctctggagaactccctgattgac
attatgagggctgagcaggactccttgaaaggacgctacagcttctcccaccaggctgga
gacgggcctctacccatgaacgcgagaagttatggcagaagacgaggccattcctctctg
ttcccgatggaggacgagcgctccttcggcgaggacgagtccggcgagcagggcctcacg
ggcctcgggtcggcccactgcttcccccacctcaacggggagcgcgtggagcgatactca
cgcaaagtgttcgtgggcgggctgcccccggacatcgatgaagatgagattactgccagt
ttccgccggttcggccacctgttcgtggactggcctcacaaggcggagagcaagtcctac
ttccccccgaagggatacgcattcctgttgtttcaagacgagagctccgtccaggccctg
atcgacgcctgcatccaggaggacggcaagctgtacctgtgcgtctccagccccaccatc
aaagacaagccggtccagatccggccctggaacctcaacgacagtgactttgtgatggac
ggctctcagccgttggaccccaggaaaaccatctttgtgggcggcgtcccccgcccccta
cgcgcagtggagctcgccatgatcatggaccgcctgtatgggggcgtgtgttacgctggg
atcgacacggaccccgaactcaagtatcccaaaggggcggggcgagtggccttctccaat
cagcagagctacatcgcggccatcagcgcccgcttcgtccaactgcagcacggggagatt
gataaacgggtggaagtgaagccatacgtcctggacgaccagctgtgtgacgagtgccag
ggcacccgctgcgggggcaagttcgcgccgttcttctgcgccaacgtcacctgcctgcag
tactactgcgagtactgctgggccgccatccacagccgggccgggcgcgagttccacaag
ccgctggtgaaggagggcggagaccggccgcgacacatctccttccgctggaactga
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