Pseudoliparis swirei (Mariana hadal snailfish): 130209766
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Entry
130209766 CDS
T09868
Symbol
pdgfc
Name
(RefSeq) platelet-derived growth factor C isoform X1
KO
K05450
platelet derived growth factor C/D
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04010
MAPK signaling pathway
pswi04020
Calcium signaling pathway
pswi04510
Focal adhesion
pswi04540
Gap junction
pswi04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pswi04052
]
130209766 (pdgfc)
Cytokines and neuropeptides [BR:
pswi04052
]
Cytokines
Growth factors (RTK binding)
130209766 (pdgfc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
130209766
NCBI-ProteinID:
XP_056295567
LinkDB
All DBs
Position
19:complement(23830213..23878258)
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AA seq
409 aa
AA seq
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MRIYLDLGRFNFHFPPKRTDDTDYVDSTLLLPSPNVSETALVSRKRRTCVVSQTIPSTAL
CPPPLIQMILPFIFLLASLLQQYGSEAESSHVSKFQPPSVKEQNGVQDSHQEKVITVSGE
GMVHSPDFPRTYPRNTVLVWRLVATDNMRIQLAFDERFGLEDPEDGMCKYDFVEIEDPTE
NTVLGRWCGSQSAPASHTSKGSQIRIRFISDEYFPSEPGFCIRYSVLPVSVSEPEVPAVL
PMSQQGIEDLSEAVAGLGTVEEVMKYLEPERWQLDMDELYKPTWHVLGKSFILNKKARGG
LDLNLLREEVRLYSCTPRNFSVSLREELKRTDAIFWPSCLLVKRCGGNCACCSHRCYDCQ
CVPARVAKKYHEVLLLKHRIGVRGLQKSMVDVPLEHHEECACVCKDDLD
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaggatttatcttgatttagggagatttaactttcactttccccccaaaaggactgat
gatacagattatgtggattctactctgcttttaccctctccaaatgtgtcggaaacagca
ctggtgtcccgtaaacgacgcacgtgtgtggtgagccaaaccatcccgtcaacagcgctt
tgcccaccgccactcatccaaatgatccttccattcattttccttcttgcatcgcttctc
caacaatatggctcggaagctgaatcaagtcacgtcagcaaatttcaacccccaagtgta
aaggagcaaaacggagtgcaagattcccatcaggagaaggtcattacagtgtctggagag
ggaatggtccacagcccagacttcccacgcacttatccccggaatacggtgttggtctgg
agactggtggcgaccgacaacatgaggatccagctcgcctttgacgagaggttcggtctg
gaggacccagaagatggcatgtgcaagtacgactttgtggagatagaggatccgactgag
aacaccgtcctgggtcgctggtgcgggtcacagtcggcaccagctagtcacacttctaaa
ggcagtcagatcaggatccgcttcatctcagatgagtacttcccctccgagccgggcttc
tgcatccgctactccgtcctccctgtgagtgtctcagaaccagaagtccccgcagtgctc
ccaatgtcccagcagggcattgaggacttgtcggaggcggtggccgggctgggcaccgtg
gaggaggtcatgaagtacctggagccggagcgatggcagctggatatggacgagttgtac
aagccgacatggcatgtcctgggaaaatcctttatccttaataagaaggccagaggagga
cttgatctcaatctgttgagggaggaagttcgactgtacagctgcactccacgtaacttc
tctgtgtccttgcgtgaggagctgaagaggacagacgccattttctggccaagctgcctc
ctggtgaagcgctgtgggggaaactgtgcctgctgctctcaccgctgctacgactgccag
tgtgttcccgccagggtggcgaagaaataccacgaggtgctgctgttgaaacaccgaatc
ggcgtcagaggcttgcagaagtccatggtcgacgtgcccttggagcaccacgaggagtgc
gcctgtgtgtgcaaagatgacttggactga
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