KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130209818
Entry
130209818         CDS       T09868                                 
Name
(RefSeq) integrin alpha-6-like isoform X1
  KO
K06485  integrin alpha 6
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04382  Cornified envelope formation
pswi04510  Focal adhesion
pswi04512  ECM-receptor interaction
pswi04514  Cell adhesion molecule (CAM) interaction
pswi04518  Integrin signaling
pswi04810  Regulation of actin cytoskeleton
pswi04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    130209818
   04514 Cell adhesion molecule (CAM) interaction
    130209818
   04518 Integrin signaling
    130209818
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    130209818
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    130209818
   04810 Regulation of actin cytoskeleton
    130209818
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    130209818
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pswi04147]
    130209818
   04515 Cell adhesion molecules [BR:pswi04515]
    130209818
   04090 CD molecules [BR:pswi04090]
    130209818
Exosome [BR:pswi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   130209818
  Exosomal proteins of breast milk
   130209818
Cell adhesion molecules [BR:pswi04515]
 Integrins
  Integrin alpha subunits
   130209818
CD molecules [BR:pswi04090]
 Proteins
  130209818
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 MFS_Mycoplasma
Other DBs
NCBI-GeneID: 130209818
NCBI-ProteinID: XP_056295655
LinkDB
Position
19:complement(21839291..21852639)
AA seq 1060 aa
MAKHWPVVYLLSFWHLETLNVTAFNLDTQNVLQRNGDPGSLFGFSVAFHQQLNPTKKNLL
LVGAPRSKHQNQVNVTGVVYQCDMTKISERCRPIEFDNEEFLDSKGINDQWMGVRVTSQG
PGKNVMTCAHRYQQWSPSPSLYVPRLVTGQCYLLGDDLQVGKEERTWRRVVCDSEHLSRR
QKDPDWFAYCQQGHGASFAKDNVSLLFGAPGAYQWKGIVRMELLDNLDISSADSRETGDV
DKFNMKLIPLQRNSYLGFSTDSGMALLRQGELTVVSGAPRGGYSGQVAFLKADPEAQRSL
SVELILSGPGLASSFGYDVAVGDFNGDGWEDLAVGAPQFFVKDGVVGGAVYIYSNSKGKH
WEEIVPTQLLGHKESMFGLAVENVGDINQDGYGDIAVGAPYDGSGQVYLYYGSSDGINKK
PVQVLSSGSNKVTLFGYSLSGNLDVDNNQYPDLAVGSLSDSVFVFRARPVVSVSSSLRLT
PTEIDITQEQCDKHTCYVAAQACFTYTAHPASFNPKLMLNYTFGADAERKQMRLPHRVNL
ASSQGKLELPGQKTQICTEIQLRLLRDIKDRLHSIPVSVTVSLWSSSQTSGTSADLPEVT
PVLNLFQQNSIVSEIILINKGCGMDNICQSNLELQYKFCSRKTQNNQDVFKSLAREDGVT
VITPSEEDIALEIIVTNRNGDDAHQSHSVISLPDTLHYSSIVYGTASETQVSCTANDKGT
LVDCELGNPLQRDAEVTFYVLLATSGISLSTKDVNVTLQLETTSVQNLQPVVALAKVVFE
LQLQVYGLARPSQVSLGANLRGESAITSVDEIGTAVQYEFRITNLGRSLKYFANASLNIH
WPKENSVGKWLLYLTQISSKGVQPVSCSPMDEVNPLRHVKGWHDSSRKRREAEHEAKHEA
LSTAGFTFLPKRRKYKTLNCSDGLKCVQIRCPLLGLDSTAVMVLHSRLWNTTFTEDYSSL
NYLDIVVDATLSLTNSPENIELKPEKLGTKIKLTVFLERKAERVTKVAWWIIFLTVVVLL
LLLAVVGFLLWKWGCINCLAQNEKRPHDGDPNKETAPLKG
NT seq 3183 nt   +upstreamnt  +downstreamnt
atggcaaagcactggcccgtggtgtatctgttgagtttctggcacctcgagactcttaat
gttacagctttcaatctggacacccagaatgtgctgcagagaaatggagatccgggaagc
ctgtttggattttcggttgccttccaccagcagctgaacccgaccaaaaagaatctattg
ctggtcggagcgccacgatcaaaacaccagaaccaagtgaatgttacaggcgttgtttac
cagtgtgacatgactaaaatatccgagcgctgccggcccattgagtttgataacgaagag
ttcctcgatagtaaaggcataaacgaccagtggatgggagttagagtgacgagccaaggt
cctggtaaaaatgtaatgacttgtgctcatcgataccagcagtggagcccgagtcccagc
ctttacgtccctcgcttggtgacgggtcagtgttacctcttaggagatgacctgcaggtc
gggaaggaggagaggacgtggaggagggtggtctgtgactctgaacacttgtccagacgt
caaaaggacccggactggtttgcatactgccaacagggtcacggagcatcttttgcgaag
gacaacgtgtctctgttatttggagcaccaggagcgtatcagtggaaaggaatcgtacga
atggagctcctggataacctggacatctccagtgcagattctcgtgagacaggggatgtt
gacaagttcaacatgaaacttattcctctccaaagaaacagctacctgggattctccact
gactctggtatggccctcctcagacagggggagctgaccgtcgtgtccggagcgcccaga
ggcggttacagcggccaggtggcatttcttaaggcggatcctgaggcacagagaagtttg
tccgtggagttaatcctctctggtccaggcctggcctcctcctttggctatgatgtggct
gtgggggatttcaatggtgatgggtgggaggacctcgctgttggagcaccacagttcttt
gttaaagatggtgtggtcggcggagcagtctacatctatagcaacagcaaagggaaacac
tgggaggaaattgttccaactcaacttcttggccataaagaatcaatgtttggcctcgcg
gtggaaaacgtaggagacatcaatcaagatggttatggagatattgccgtgggggcgcct
tatgacggttctggtcaagtgtacctgtactacggctcatcagatggcatcaacaagaag
ccagtgcaggtcctctcatcaggatccaataaagtcactctgtttggatattctctgtcg
ggtaacttggacgtggataacaatcagtacccagacctggctgtgggatcgctatctgat
tctgtctttgtcttcagagcaaggccagtggtcagtgtgagcagctctctgaggctaacg
cccactgaaatagacatcacacaggaacaatgtgataaacacacatgttatgttgcagct
caggcatgctttacgtacacggcacatccagcatcgttcaaccctaaattgatgctcaac
tacacgtttggggcagatgctgagaggaaacagatgaggcttcctcacagagtgaacttg
gcttcatctcaaggaaaactggaactgcccggacagaagacacagatctgtactgagatc
cagctacgacttctgcgtgatattaaggaccggctgcacagtatccctgtgtccgtcact
gtgtctctgtggagctccagtcagacctccgggacgagtgcagatctgcccgaagttact
ccggtcctcaacctcttccagcaaaacagtattgtctcagagattatcttaataaacaag
ggctgtggcatggacaacatctgccaaagtaacctggagttacagtacaagttctgttcc
agaaaaacacaaaataatcaagatgttttcaaatcactcgccagggaggatggtgttaca
gtcatcactccttctgaagaagacatcgctctggagatcattgtgacgaacagaaacggg
gacgacgcgcaccagagtcactccgtcatcagcctcccggatactcttcattactcctcc
attgtctacggtacagcatcggagacacaagtgagttgtacagccaatgacaaaggaaca
ctagtcgactgtgagctgggaaacccgctccagagagacgcagaagttactttttatgtc
ctgctcgcaacatccggcatctcactgagtacaaaagacgtcaacgtcacactgcaactt
gaaacgacgagtgtgcagaatctacaaccagttgtggcattagccaaagtggtttttgag
ctgcagctacaagtatatggactagccaggccctctcaagtgtcacttggggcaaacttg
aggggtgagagcgccataacctcggtggatgaaattggaactgcagttcaatatgaattt
aggataacaaatttgggcagatcactgaagtattttgccaatgcatcactaaacatccac
tggccgaaagagaactctgtgggaaaatggcttctgtacttgactcagatcagcagtaaa
ggtgtacagcctgtctcctgctcacctatggatgaggtcaatccactgagacatgtaaag
ggttggcatgactcctccaggaaaagacgtgaagccgaacatgaagccaaacatgaagcg
ctctcgactgctggattcacatttcttccaaaaagaaggaaatacaaaactttgaactgc
tcagatggactgaagtgtgtgcagatacgctgccctctgctgggtctggacagtactgca
gtcatggttctgcattcccgcctctggaacaccactttcacagaggattacagctctttg
aactacctggacattgtcgtggatgccactctcagtttgacaaactctccagagaatatt
gaactcaaaccagagaagcttgggacaaagataaaactgacagtgttcctggagagaaaa
gctgaacgtgtcaccaaagtggcgtggtggatcatcttcctcactgtggttgtgttgctc
ctgctgttggcagttgttggcttcttgttgtggaagtgggggtgcatcaactgcctcgct
cagaacgagaagcggccacacgatggagatccaaacaaagagaccgctcccctcaaaggc
taa

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