Pseudoliparis swirei (Mariana hadal snailfish): 130209830
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Entry
130209830 CDS
T09868
Symbol
elp1
Name
(RefSeq) elongator complex protein 1 isoform X1
KO
K11373
elongator complex protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pswi03016
]
130209830 (elp1)
Transfer RNA biogenesis [BR:
pswi03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
130209830 (elp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
TPR_GEMI5
Beta-prop_WDR35_TULP_N
Tfb2
Motif
Other DBs
NCBI-GeneID:
130209830
NCBI-ProteinID:
XP_056295683
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All DBs
Position
19:complement(26606821..26629280)
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AA seq
1313 aa
AA seq
DB search
MRNLKLLKRLSSSELRAPGSPLRLSVRADTGSLLVASHYSITEYDPRTGQVVSEASLAAA
GFLPEDGSGAVVGLQDLAELESACLSTAGGDVVLFNFNTCQLECVGSVDSGLTAMSWSPD
EELVVLTTGQETIIMMTKHFEPITEVGIHQDDFGEGKFVTVGWGKKETQFHGSEGKQAAQ
RKTPEVHPVAAWDDGAPRVTWRGDGQLFAVGAVCPRTGARKVRVWNREGVLQATGEPANG
LEPALCWKPSGGLITSTQRHPNKHSVVFMEKNGLLHGDFTLPLRRDQAKVKDLLWNSDST
VLAVWLEDLSAGEDQQVNTSIQLWVVGNYHWYLKQSLDFGGDPQRAPVCVCWDPERPLRL
HLATRGWTCVTYDWGWATERSPGTDGADGANVAVIDGDKILVTSFRRCVVPPPMCSFELQ
LTAPVNQVTFLCQPQRTNQLAALTSDGRISVYVQDSGEQVGRTADGFRAASRPLVLRKTF
RVAVLGAEPLALRQLLWLEDELFVGVSSGLPPTSSTLMMLRPSRDADDTLTVSSEVEVDG
VVVSVIHGSQTGTVALQLEDGQIKKLLWDGPDLSVEEWRDATGSCVNFPVPCVQTALCSI
SGEERLLGLTDRSHLYAGDTELASNISSFAVCNDFLLITTHSHTCRCLQLSTLGLAGLQA
ALASDGGQNDESLRRVERGSRIVTVVPQDTRVVLQMPRGNLETVHHRALVLAQLRTWLDS
LMFRESFECMRKLRINLNLLYDHHPKVFLENLEAFITQLDSISHINLFITELKEEDTTST
MYPRGPEDRPVQARPVAGQKKVDVVCDALRGAMESMDPNKFFLCVLSTHVKKTEPELEVA
LQKVHELRVNPPRGVGAVSAEEALKFLLFLVNVNDLYEHSLGTYDFDLVLMVAEKSQKDP
KEYLPFLNMLKSLETNYQRYSIDKHLKRYRKALQHLSKCGEEHFHEALQLVREHKLHSEA
LRLFAADGARHKALSCAYAEHLMEQQQPEQAGLLLWRCGEPVGALQAFASSCSWRNAICT
AQQIPLPADQLALLARDLAEKLIEQRRFSEAALLLDQYAKDCEEAILALITGSVWEEALR
LIYMHDRQDITETNLKPALLEAVITQTSFLEAQVSAFCRYRARLAVVREQKSRLGLLDED
GPDCPDAELFSEASSVMTGSKYSQSNSRVSSRSSKNRRKAERKKLSLKEGSPMEDRALVY
TLGEILSTVDKMREEVHGLLKALVLFQFDRQAEKLQPAYEEALQLMEASVPEVWPPEGPQ
GPQAQLTGPNSTANSITASYQQQQRPAASLPAAEVPMPPKMRTGVKWKLNILM
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacctgaagctgctgaagaggctgagcagctccgagctgcgagctcccggctcc
ccgctgcgtctctccgtgagggccgacaccggctcgctgctggtggcttcccactactcc
atcacggagtacgacccgcggaccggccaggtggtcagcgaggcgtcgctggcggccgcc
ggcttcctgccggaggacggcagcggcgccgtggtcggcctgcaggacctcgccgagctg
gagtcggcgtgtctgtccacggccggcggcgacgtcgtcctcttcaacttcaacacctgc
cagctggagtgcgtcggcagcgtcgacagcggcctgaccgccatgagctggagccccgat
gaggagctggtcgtcctcaccaccggtcaggagacgatcatcatgatgaccaaacacttt
gagccaatcactgaggtcggaatccaccaggacgacttcggtgaagggaagttcgtcacg
gtgggctgggggaagaaggagactcagttccacggatcagaggggaagcaggccgcccag
aggaagaccccggaggttcacccggtcgcggcgtgggacgacggcgccccgcgggtcacg
tggcgaggcgacggtcagctgttcgccgtcggcgccgtctgcccccggaccggagcccgc
aaggtccgggtctggaaccgggagggggtcctgcaggccaccggcgagccggccaacggc
ctggagccggcgctctgctggaagccctccggcggcctcatcacgagcactcagcgccac
cccaacaaacacagcgtggtgttcatggagaagaacggcctgctgcacggagacttcacc
ctccccctccgacgagaccaggccaaggtgaaggatctgctgtggaacagcgactccacg
gttctggccgtgtggttggaggacttgtccgctggagaggaccagcaggtcaacacctcc
atccagctgtgggtggtggggaactaccactggtacctgaagcagagcctggacttcggc
ggggacccccagagggccccggtctgcgtctgctgggatcccgagcgccccctcaggctc
cacctggccacgcgcggctggacctgcgtcacctatgactggggctgggccaccgagagg
agccccgggacggacggcgccgacggcgccaacgtggccgtgatcgatggagataaaatc
ctggtgacgagcttcaggcggtgtgtggttcctcctcccatgtgttccttcgagctccag
ctgaccgcgccagtcaaccaggtgaccttcctgtgccaaccccagaggaccaatcagctg
gcggcgttgacctccgacggacggatttcagtctacgtccaagattctggagaacaagtc
ggcagaacggcagacgggttccgcgcggcgtctcgtcctctggtcctccggaaaaccttc
agggttgccgttctgggggcggagcctctggccctgcgccagctgctgtggcttgaggac
gagctgtttgtgggcgtgagctccggtctgccgcccacctcctccaccttgatgatgctc
cgcccctcacgggacgccgatgacacgctgactgtcagctctgaagtggaagtggacgga
gtcgtggtcagcgtcatccacggctcccagaccggcacggtggcgctgcagctggaggac
ggacagatcaagaagctgctctgggacggtcccgatctgtccgtggaggagtggcgtgac
gccaccgggagctgcgtcaacttcccggttccctgcgttcagacggcgctctgcagcatc
agcggggaggagcgtctcctcggcctgacggacagatctcacctgtacgctggagacacg
gagctggcctccaacatttcgtccttcgcggtttgcaacgacttcctcctcatcaccact
cactcccacacctgccgctgcctccagctgagcacgctcggcctcgcaggcctacaggcg
gccttggcctctgacggaggtcagaacgacgagtccctgcgccgggtggagagggggtcc
aggatcgtcaccgtggtaccgcaagacaccagagtggtgctgcagatgccgcgtgggaac
ctggagacggtgcaccatcgggcgctggtgttggctcagctcaggacgtggctggacagt
ctgatgttcagagagtccttcgagtgcatgaggaagctgaggatcaatctgaacctcctc
tacgaccaccaccccaaggtcttcctggagaacctggaggccttcatcacgcagctggac
tccatcagccacatcaacctcttcatcacggagctcaaggaggaggacaccaccagcacc
atgtacccccgaggccccgaggaccgcccggtccaggcccggccggtcgccgggcagaag
aaggtggatgtggtgtgcgacgctctacgcggcgccatggagtccatggatcccaacaag
ttctttctgtgcgtgctgtcgacccacgtgaagaagacggagccggagctggaggtcgct
ctgcagaaagtccacgagctccgagtgaaccctcctcgcggcgtcggggccgtgagcgcc
gaagaggcgctgaagttcctcctcttcctcgtcaacgtcaacgacctgtacgaacattct
ctgggaacgtacgacttcgacctcgtgctcatggtggccgagaagtcacagaaggacccc
aaagagtacctccccttcctcaacatgctgaagagcctggagaccaactaccagcgctac
tccatcgacaagcacctgaagcgctaccggaaggccctgcagcacctcagcaagtgcgga
gaggaacacttccacgaggctctgcagctggtgagggagcacaagctgcacagcgaggct
ctgaggctgttcgccgccgacggcgcccgccacaaggctctgagctgcgcctacgccgag
cacctgatggagcagcagcagccggagcaggccggcctgttgctgtggcgatgcggcgag
ccggtcggcgccctgcaggcgttcgccagcagctgcagctggaggaacgccatctgcacc
gcgcagcagatcccactgccggccgaccagctggcgctgctggccagagacctggcggag
aagctgattgagcagcgacgattctcagaagctgctctgctgttggaccagtacgccaaa
gactgtgaggaggccatcttggctctgatcaccggctccgtctgggaggaggcgctccga
ttgatttatatgcacgaccgacaagacatcacagaaaccaacctcaagccggcgctgctg
gaagccgtcatcacccagacctccttcctggaggctcaggtctcggcgttctgccggtac
cgggcccggctggcggtggtccgggagcagaagagccggctgggcctgctggacgaggac
gggcccgactgccccgacgccgagctcttctctgaggccagcagcgtgatgaccgggtcc
aagtactcccagagcaactcccgcgtgtcctcacgctcgtcaaagaaccggcgtaaagca
gagaggaagaagctgagtctgaaggaaggaagcccgatggaggaccgtgcgctggtctac
actctgggggagatcctcagcaccgtggacaagatgagggaggaggtgcacggcctgctc
aaggctctggtgctgttccagttcgaccggcaggcggagaagctgcagccggcctacgag
gaggcgctgcagctgatggaggcctccgtccctgaggtgtggcccccagaggggccgcag
ggcccccaggctcagctcacggggccgaactccaccgccaacagcatcacagcttcttac
cagcagcagcagagacctgctgcctcgctaccagctgctgaagttccgatgcctcctaag
atgaggaccggggtcaagtggaaactcaatatcctcatgtag
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