Pseudoliparis swirei (Mariana hadal snailfish): 130209835
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Entry
130209835 CDS
T09868
Symbol
cyfip2
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04810
Regulation of actin cytoskeleton
pswi05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
130209835 (cyfip2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130209835 (cyfip2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130209835 (cyfip2)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
130209835 (cyfip2)
Factors involved in mRNA localization
Other mRNA localization factors
130209835 (cyfip2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
zf-CW
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
130209835
NCBI-ProteinID:
XP_056295696
LinkDB
All DBs
Position
19:2557111..2579974
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AA seq
1252 aa
AA seq
DB search
MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMKFMYFQRKAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLQQQLEVIPGYEELLAD
IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFK
LQVVPLFGDMQIELSRYIETSAHYEENKSKWTCTQSSISPQYNLCEQMVQIREDHIRFIS
ELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSTHVMEVYSWKLVHPTDK
FCNKDCPGTAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNQAIRNTIYA
ALQDFAQMTLREPLRQAVRKKKNVLISVLQAIRKTVCDWDGVREPPNDPCLRGEKDPKGG
FDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSCLDGPIVVAIEDFHKHSFFF
THLLNFSEALQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMME
YVLYPLDLYNDSGYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGSVL
LDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISTAMYKSLDH
AISRFESEDLTSIVELEWLLEINRLTHRLLCKHMTLDSFDAMFREANHNVSAPYGRITLH
VFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANAQPYYLYGSKPLNIAYSHIY
SSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICRL
PRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCDL
LHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLLT
KERLCCGLSMFEVILTRIRSFLQDGVWRGPPPTNGVMHVDECMEFHRLWSAMQFVYCIPV
GTHEFTAEQCFGDGLNWAGCAIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPLK
KMADRIRKYQILNNEIFAILNKYMKAVETDSSTVEHVRCFQPPIHQSLATTC
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccacgtgaccctggaggatgccctgtccaacgtggacctgctggaggagctg
cccctcccggaccagcagccatgcatcgagccccctccctcctccatcatgtaccaggcg
aactttgacaccaacttcgaggacaggaatgcgttcgtgaccggcatcgcccgttacatc
gagcaggcgacggtccactccagcatgaatgagatgctggaggaaggacaagagtacgct
gtgatgctctacacctggaggagctgctccagagccattccccaggtgaaatgcaacgaa
cagcccaacagagtggagatctacgagaaaaccgtggaggtcttggaacctgaagtcacc
aagctcatgaagttcatgtacttccagcggaaagccatcgagcgcttctgcagcgaggtg
aagcgcctgtgtcacgccgagaggaggaaggactttgtgtccgaggcctacctgctcacg
ctgggcaagttcatcaacatgttcgcggtgctggacgagctgaagaacatgaagtgcagc
gtcaagaacgaccactcggcctacaaaagggccgctcagttcttgaggaagatggccgac
cctcagtccatccaggagtcccagaacctctccatgtttttagccaaccacaacaggatc
acgcagtgcctgcagcagcagctggaggtgattcccggctacgaggagcttctggcggac
atcgtcaacatctgcgtggactattacgagaacaagatgtatctgacgcccagcgagaag
cacatgctgctcaaggtgatgggcttcggcctttacctgatggacggcaacgtgagcaac
atctataaactcgacgccaagaagaggatcaacctgagcaagatcgacaagttcttcaag
cttcaggtggtgccactgttcggagacatgcagatcgagttgtcccgctacatcgagacg
agcgcccactacgaggagaacaagtccaagtggacgtgcacccagagcagcatctcgccg
cagtacaacctgtgtgagcagatggttcagatccgggaggaccacatccgcttcatctcg
gagctggcgcgctacagcaacagcgaggtggtgacgggctcgggcctggacagccagaag
tccgacgaggagtaccgggagctgttcgacctggcgctgaggggcctgcagctgctgtcc
aagtggagcacgcacgtcatggaagtttactcttggaagctggtccatcccacggataag
ttctgcaacaaggactgtccgggcacggcggaggagtacgagcgggccacgcgctacaac
tacaccagcgaggagaagttcgccctggtggaggtcatcgccatgatcaaagggctgcag
gttctgatgggccggatggagtctgtgttcaaccaggccatcaggaacaccatctacgcg
gcgctgcaggactttgcccagatgaccctcagggagccgctgcgccaggcggtacgcaag
aagaagaacgtcctcatcagcgttcttcaggccattcgtaagacggtgtgtgactgggac
ggggtgagggaacccccaaatgacccctgcctgaggggggagaaggacccaaaaggtgga
tttgacatcaaagtgccccgcagggctgtcggaccctccagcacacagctctacatggtg
cgcaccatgctggagtccttgatagcggataagagcggctccaagaagacgctccgcagc
tgcctggacggacccatcgtggtcgccatcgaagacttccacaaacattccttcttcttc
acacacctgctgaacttcagcgaggccctgcagcagtgctgcgacctgtcccagctgtgg
ttcagagagttcttcctggagctcaccatgggtcgcaggatccagttccccatcgagatg
tccatgccctggatcctcacggaccacatcctggagaccaaggagccctccatgatggag
tacgtgctgtatcctctggacctgtacaacgacagcggctactacgcgctcaccaagttc
aagaagcagttcctctacgatgaaatcgaggccgaggtgaacctctgcttcgaccagttc
gtctacaagttggcggatcagatattcgcctactacaaagcgatggctggaagcgtcctc
ctcgacaagcgcttcagggcggagtgcaaaaactacggcgtgatcatcccgtacccgccg
tcaaaccgctacgagacgctgctcaagcagagacacgtgcagctgctcggccgctccatc
gacctgaaccgcctcatcacccagaggatctcgacggccatgtacaagtccctggaccac
gccatcagccgcttcgagagcgaggacctcacttccatcgtggagctggagtggctgctg
gagatcaaccggctcacccaccggctcctctgtaagcacatgaccctggacagcttcgat
gccatgttccgcgaggccaaccacaacgtctccgccccctacgggcggatcacgctgcac
gtcttctgggagctcaacttcgacttcctgcccaactactgctacaacggatccaccaac
cgtttcgtacgtacggccatccccttcacccaggagcctcagagagacaagccggctaac
gcgcagccttactacctgtatgggtccaagcctctgaacatcgcctactcccacatctac
agctcctacaggaacttcgtgggcccgccccacttcaaaaccatctgccgtctcctcggt
taccaaggcatcgccgtggtgatggaggagctgctcaagatagtcaagagcctgttacag
ggcaccatcctgcagtacgtgaagaccctgatcgaagtcatgcccaagatctgccgcctt
cctcgccacgagtacggctctccaggtatcttggagttcttccaccatcagctcaaggac
atcatcgagtacgccgagctgaagaccgacgtgttccagagcctgagggaggtgggcaac
gccatcctcttctgcctgctcatcgaacaagctctgtcccaggaggaagtgtgtgacctg
ctgcacgccgcgcccttccagaacattctgcccagagtctacatcaaagagggagagcgt
ctggaggtgaggatgaagaggctggaagccaagtacgcccctctccacctcgtgcctcta
atcgagaggctgggaaccccacagcaaatcgccatcgcccgcgagggcgacctgctgacc
aaagagcgcctgtgctgcggcctctccatgttcgaggtcatcctgacgcgcatccgcagc
ttcctgcaggacggcgtgtggcgcgggccgccgcccaccaacggcgtgatgcacgtggac
gagtgcatggagttccaccgcctgtggagcgccatgcagttcgtgtactgcatcccggtg
ggaacgcacgagttcacagccgagcagtgcttcggcgacgggctgaactgggccggctgc
gccatcatcgttctgctgggccagcagcgccgcttcgacctctttgacttctgctaccat
ctgctcaaagtccagaggcaggacggcaaggacgagatcatcaagaacgtgcccctgaag
aagatggcggaccgcatccggaagtaccagatcctcaacaacgagatcttcgccatcctc
aacaagtacatgaaggcggtggagacggacagttccaccgtggagcacgttcgctgcttc
caacctcctatacaccaatctctggctaccacctgttga
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