Pseudoliparis swirei (Mariana hadal snailfish): 130209872
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Entry
130209872 CDS
T09868
Symbol
prom1a
Name
(RefSeq) prominin-1-A
KO
K06532
prominin 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pswi04147
]
130209872 (prom1a)
04090 CD molecules [BR:
pswi04090
]
130209872 (prom1a)
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
130209872 (prom1a)
CD molecules [BR:
pswi04090
]
Proteins
130209872 (prom1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Tweety
DUF3587
Motif
Other DBs
NCBI-GeneID:
130209872
NCBI-ProteinID:
XP_056295746
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All DBs
Position
19:24764781..24827650
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AA seq
891 aa
AA seq
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MWKTGVPVLLWVLLASGELHQETESRRLPPPGRLDFGYVPAGVYETLAHYEPGPIGILFH
MVHAFLCVVQPNAFPKDLIVKLATDKFGAIQAEYQKPQNIVLTLQAVYYEMGFLVCAAVG
LLFAVLVPMIGVFFCMCRCCDNCGGEMHQRQRKNADCRRGLLGTLLFSTSLVITIGVLCA
YSANQNLSSQVKNIRRLVNSNMRDLHTFANDTPMQIDYLISQYATTKSKVIYDLDNIGPL
LGGRIHDQLDQEVHPALDRVLNMAGAMRETKEALDNVNVGLEVLQEGTGRLNFNLSLVRT
GINRTLSDPGCRDEDSDATTAQLCRNIRQSLSLLQIGANFTRLPNVNAQLEKMNDVLRTD
LSAIVQQGFASLNDTPRTVVEQTRSVVESVQGLVDGIGKNISRFSKVFPVQSSLSNFTVF
ISHAHAKIEDLYPDIDKMDFYRWIGCIGLCCMVVLVLAFNYLGLLCGTLGYDKHASPTTR
GCISNTGGTMLMAGVGFTVIFSWVLMGVVTTIFLVAGNMEKLFCEPFHTKDVFKVVDTPH
LVNPDWKNFIPGYIYNDSDLELTAESLYSTCKENKGIYSALRLDKVFNISSFLNTTVFTK
EVVSQLDSVRIDLRGIVLLEAEGRRNLLDFSEAGLSEINYADYLEEVNKGVTVMDLLLFA
RELEAQTDLMPRGALQTALKGHAGTLRQIHRQQIVSMEHAMSALNQSMRFLERTTTDLPN
KVLAVLDAIEAAQYLISQNATHLINRETERYTATIVGYFHQYIEWVKTSLALEVAPCKPF
SNMLDTAEIMTCSFLVDSMNTFWMGLGCSTLFLLPSIILAVKLAKFYRRMDTEDVYDDIE
TIPMKTMEIGNNGYHSESPQGIPNPMLTSVPPYDTMNRFPRASAPPRHIDW
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagaccggggtcccggtgctgctgtgggtgctcctcgcgtccggagaactccac
caggagacggagtcgcggaggctgccccctccggggaggttggatttcggttacgtgccc
gcgggagtttacgagaccctggcccactacgaaccgggaccgatcgggatcctgttccac
atggtgcacgcgttcctctgtgtggtgcaacccaacgcgttcccgaaagatctcattgtc
aaactggcaacggacaagtttggagccattcaggcggaataccaaaagccacagaacata
gtgctgacccttcaggccgtctactacgagatgggcttcctggtgtgcgcggcggtcggc
ctgctgttcgccgtcctggtgccgatgatcggcgtcttcttctgcatgtgccgctgctgc
gacaactgcggcggcgagatgcaccagcgccagaggaagaacgccgattgccgccgcggc
ctcctgggaacgctgctgttctccacctcgctggtcatcacgatcggcgtgttgtgtgcg
tactctgccaaccagaacctgagctctcaggtgaagaacatacggcggctggtgaacagc
aacatgagggacctgcacaccttcgccaacgacacgccgatgcaaatcgattacctgata
tcccaatacgccacgaccaagagcaaagtcatctacgacctggacaatataggtccattg
ttgggtggaaggatacacgatcagttggatcaggaggtccatccggccttggacagagtg
ctcaatatggctggagccatgcgagaaaccaaggaggcccttgacaacgtcaacgtgggc
ctggaggtcctccaggagggaaccgggcggctcaacttcaacctgagcctggtccggacc
ggcatcaaccggaccctcagcgacccgggctgccgcgatgaggactcggacgccaccacc
gcccagctgtgtcgcaacatccgccagtcgctgtccctgctgcagatcggcgccaacttc
acgcggctccccaatgtgaacgctcagctggaaaagatgaacgacgtcctgagaacggac
ctcagtgccatcgtccagcagggcttcgcctcgttgaacgacacgcctcgcacggtggtg
gaacagaccagaagtgttgtggagagtgtgcagggtctggtggacggcatcggcaaaaac
atcagcaggttttccaaggtgttccccgtgcagagctccctgtccaacttcactgtgttc
attagccacgcccacgccaagatcgaggacctctaccccgacatcgacaagatggacttc
tacaggtggatcggctgcattggtctctgctgcatggtggtcctcgtcctggccttcaac
tacctgggcctgctgtgcggcacgctgggctacgacaagcacgcctcgcccaccacgcga
ggctgcatctccaacacgggaggaacgatgctcatggccggcgtgggctttaccgtcatc
ttctcgtgggtgctgatgggagtggtgaccaccatcttcctggttgcaggaaacatggag
aaactcttctgtgaacccttccacaccaaagacgtcttcaaggtggtggacacccctcat
ctggtcaacccagactggaagaacttcatccccggctacatctacaacgactccgacctg
gagctgacggcggagagcttgtacagcacttgcaaagagaacaaaggcatctactcagcc
ctgcgtctggacaaggtcttcaacatctcctcgttcctgaacacgacagtgttcaccaag
gaggtggtgagtcagctggacagcgtcaggatcgacctgaggggcatcgtcctgctggag
gccgaggggaggaggaacctcctggacttctctgaggcggggctgtcggaaatcaactac
gccgactacctggaagaggtcaacaaaggagtcacggtgatggacctgctcttattcgcc
agagagctggaggcccagacggacctcatgcccagaggcgctctgcagaccgccctgaaa
ggccacgccggcacgctgcggcagatccacaggcaacagatcgtctccatggagcacgcc
atgagcgcgttgaaccagagtatgaggttcctggaaagaaccaccacagatctgccgaac
aaagttttagcggttctcgatgctattgaagcggcccagtacctcatctcccagaatgca
acacatttaatcaatcgggaaacggaaagatacacggcgaccatcgttggctacttccat
caatacatagaatgggtcaaaacatcattggctctggaggtcgcaccatgcaagcccttc
agcaacatgctggacacggcggagatcatgacttgcagtttcttggttgactccatgaac
acgttctggatgggcctgggctgcagcaccctcttcctgctccccagcatcattctggct
gtgaaactagcaaagttctaccgcaggatggacacggaggacgtttacgatgacattgag
acaattcccatgaaaactatggaaattggtaataatggttatcatagtgagagtccacaa
ggtatcccaaatcctatgctgacaagcgtccctccatatgacactatgaacaggttcccg
cgggcctcggctcctccgaggcacatcgactggtga
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