Pseudoliparis swirei (Mariana hadal snailfish): 130209905
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Entry
130209905 CDS
T09868
Name
(RefSeq) centrosome and spindle pole-associated protein 1-like isoform X1
KO
K16771
centrosome and spindle pole-associated protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130209905
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pswi03037
]
130209905
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
130209905
Spindle formation proteins
130209905
Cilium and associated proteins [BR:
pswi03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
130209905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PilJ_Pilin
Motif
Other DBs
NCBI-GeneID:
130209905
NCBI-ProteinID:
XP_056295788
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All DBs
Position
19:6658158..6705538
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AA seq
1158 aa
AA seq
DB search
MDDELENFIRERKARMAEDKASLEHNPPYMEIQAKPHRAYDSTAKENIPPRSIVQEKEDR
CSVGLPLGIEYERKKQRLQHELRMDYRRYMAQKKHFDHAEPGPLSRLNNRRSIKQHLLES
QAAVLPKQRPPFRSDAAPLTEDSRGSRPPRLAEVATPCPEADEEQSSVLPRHCDRLGKPL
DRDSEEEEEEEEYFKELDLVEGRRRLHIGVEASYEKRRDYKTDGREKRETLGGKGSRALT
RNEDVEFATGLKIGAADAEDALQRRNERYRQELQEQIAEQHRNKRREKDLELKVAARGAN
DPERPPDRIRQFGRCRRGAHRALEPSATGDGETSSRGFPNNVKMGVRDGETPLPPPELPH
VAFQSPLLEYSAALGIGGGGLSPNRHPAAPSFSRATDTPRISAFPPLHPPSAPSEAYRSP
YAEPHHSYGTRTLLDPNVAYYGQLSVPPVSYWSVPAGGAPASRYGNHSPHSQHSGSSFPE
PPIQPSSEAASVDPHVRAFPSDGSRSPRDRILSYREALKQQSVICRQEASSRGNGELYNK
IQQQQERRRLEREEEERYEARLEADMKNYQPWGRGGGGAPLRDGTGNLIADLHQMHKLNE
EAYINPEQWQRRAAAAAAARSAEPPDPNERVSGAVAECSSHDASDRRSGFTHGQTSQFAR
GSVFSNQPTQRQLHEQDEYKAYLKQQIDEKMLKKAEEREQTRLEEEKEEKRLVEQRARIQ
REYDDEQERKNRKETEQRAKNSELIQLAERKKKEVERKKTEAEEEKAALRRQYEMERQAR
VEEVCREPSPPIPALQKRNGGLHQYTPRPPTVESRCSTAPLSERSLSGLQSPPVPARRNQ
LRAAGDQRDVFSELSALRRHLRSEEKRLEGRLRQVDWEGLASPLSDRRRERPQVDVFDMA
RLRLQAPVRRPTSRNTEPRNLLRTHDEVGVTGSRRWDYGDQQFSSRGSTVQDDYLDLSPP
RQTDYLTSVMGRSATGSLLESESAFIDPLGEAFPVRRTPEPEDAPVLSARERRRLSKRPQ
HPQGRDASSRPFGQQDDYAYLAGDGQEAGHGGERASRDRSGHPMSLSRHSNAAGSVALSS
VGSSPPRFSLHGLSQRGSVETLATDPWMRPGTTDTPTCSDRRPSRRERLTVRVRNVISFF
RFIPNTEYGNHVVFSFSV
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgagctggaaaacttcatcagggagcgcaaggcgagaatggccgaggataaa
gccagtttggaacacaaccctccgtacatggaaatacaggcaaaaccccacagggcctac
gattccactgctaaggagaacatccctccgaggtctatagtgcaggagaaagaggaccgc
tgcagcgtgggtctgcccctcggcatcgagtacgagcggaagaaacagaggctgcagcac
gagctccgcatggactaccggcgctacatggctcagaaaaaacactttgaccatgcagag
cccgggccactaagtcgcctcaataacaggagatccatcaagcaacacctgcttgaaagc
caggcagccgttctccccaaacagcggccgcccttccgcagcgacgcagcccctctcaca
gaggacagcagggggtcgcgacctccgcgcctcgcggaggtcgcgaccccctgccccgag
gcagacgaggagcagtcgtcggtacttcccaggcattgtgaccggctggggaagcctttg
gaccgggactccgaagaggaggaggaggaggaggaatacttcaaggagctggacctggtg
gaaggaagaaggcgcctgcatatcggggtcgaggccagttatgagaaaagacgagactat
aagactgatggaagggagaagagggagactctaggaggcaagggctcgagagcactgacc
aggaacgaggatgtggagtttgccactggccttaaaataggggcagccgatgcagaggat
gccttgcagcggaggaatgagcgctacagacaggagctgcaggagcagatagcagaacag
cacaggaacaagaggagggagaaagatttggagctgaaagtcgctgcgaggggggccaat
gatcctgagagaccgccggaccgaatcagacagtttggacggtgcagaagaggagctcat
cgggcgttggagccgtcggcaacaggagacggcgagacctcgtccagaggcttccccaac
aacgtgaagatgggtgtccgagacggagagactcccctccctcctcccgagctgccccat
gttgccttccagtccccgctgctggagtacagcgccgccctgggcattgggggaggaggc
ctgtcgcccaaccgccaccctgctgccccctccttctccagggccacggacacgcccaga
atctcagcgtttcctcctcttcatcctccgtccgcccccagtgaagcctacaggagcccg
tatgcagagccccatcactcctatggcaccagaaccctgctggaccccaacgtggcctac
tatggtcaattgtctgtccctcccgtgtcctactggagcgtaccagcagggggcgctccc
gccagtcgctatggaaaccacagccctcacagccagcacagtggcagcagcttccctgag
ccgccaatacagccgagcagtgaggctgcctctgtggacccgcacgtcagggctttcccc
tcggacggatccagatcgccccgggaccggattctcagctacagggaggctttgaagcag
cagtctgtgatatgtcggcaggaagcttccagcagagggaacggcgagctttacaacaag
atccagcagcagcaggaacggaggcgcttggagcgggaggaggaggagcgctacgaggcc
cggctggaggccgacatgaagaactaccagccgtggggtcgggggggaggaggagctccc
ctcagagacggcactggaaacctgattgctgacctccaccagatgcacaagctgaacgag
gaggcctacatcaacccggagcagtggcagaggagagccgccgccgccgccgcggcccgc
agcgctgagccccccgaccccaacgagagggtctccggtgccgtagcagagtgcagcagc
catgacgctagtgaccggcgctctggattcactcatggccaaacctcgcagttcgcccga
ggcagtgtgttttccaaccagcccacacaacgacagctccacgagcaggacgagtacaaa
gcgtacctcaaacagcagattgacgagaaaatgctcaaaaaggcggaggagagggaacag
actcgactggaggaggagaaagaggagaagaggctggtggagcagagggctcgcatccag
agggagtatgatgacgagcaggagaggaagaaccggaaggaaacggagcaaagggccaag
aattcggagctgattcaactggccgaacggaagaagaaggaagtggagaggaagaagact
gaggcggaggaggagaaggcggcgctgaggcggcagtatgagatggagaggcaggctcgg
gtggaggaggtgtgcagggagccctcgcctcccatccccgccctgcagaagagaaatggg
gggctgcaccagtacacccccagacccccgactgtcgagagccggtgctcaaccgccccg
ctgtctgagcgctctttgtccggtctccagtcccctcccgtcccggctcgcaggaaccag
ctccgagctgcaggtgaccagcgcgacgtgttcagcgagctgtcggcgctgcgtcggcac
cttcgcagcgaagagaagcgcctggagggtcgtctacggcaggtcgactgggaggggtta
gcctctcctttgagtgacagacgtcgggagcgcccccaggtggacgtgttcgacatggcc
aggctgcggctccaggctccggtccgacggccgacctccagaaacacggagcccaggaat
ctgctgcggacccacgacgaagtgggcgtgaccggcagccggaggtgggactacggggac
cagcagttcagcagccgcgggtcgacagtccaggatgattatttggacctgtccccgccc
cggcaaactgattatctgacgagtgtgatggggaggtctgccacaggttctctgctggag
tcagagagcgctttcattgaccctctaggcgaggcctttccggtgcggcgcaccccagag
ccggaagacgcccccgtgctgtcggccagggagaggaggaggctgtccaaacggccgcag
caccctcagggtcgagacgcttccagtcggcccttcggccaacaggacgactatgcctac
ctcgcaggggacgggcaggaggcggggcacggcggcgagagggcgagccgggacaggtcg
gggcatccgatgtccctcagtcgccatagcaacgcagccggatcagtggctctgtcctcc
gtaggctcctcccctccccgcttctctctgcacggtctcagccagcgaggctccgtggaa
acgctcgccacggatccctggatgcggccgggaacgacggacacgccgacgtgttcggac
cgccggccgtcgaggagggagcggctaacggtccgtgtacgtaatgttatttcgtttttt
cgtttcattccaaatacggaatacggaaatcacgtggttttttcgttttccgtttga
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integrated database retrieval system
