Pseudoliparis swirei (Mariana hadal snailfish): 130209912
Help
Entry
130209912 CDS
T09868
Symbol
lman2
Name
(RefSeq) vesicular integral-membrane protein VIP36 isoform X1
KO
K10082
lectin, mannose-binding 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130209912 (lman2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130209912 (lman2)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pswi04091
]
130209912 (lman2)
Membrane trafficking [BR:
pswi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
130209912 (lman2)
Lectins [BR:
pswi04091
]
L-type lectins
130209912 (lman2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Lectin_L-type_dom
Lectin_legB
UL42
Motif
Other DBs
NCBI-GeneID:
130209912
NCBI-ProteinID:
XP_056295805
LinkDB
All DBs
Position
19:27055952..27064850
Genome browser
AA seq
337 aa
AA seq
DB search
MGNCRAFLSTTLLFLVSRVYPVCCDITDGNTEHLKREHSLMKPYQGVGSSASSQWDFWGS
TLVTSSYVRLTPDEKSKQGSIWNTVPCHLKDWEMHVQFKVHGSGKKNLHGDGIAVWYTKD
RLHPGSVFGNQDQFLGLALFVDTFRNDLHGMDRSFPYISAMVNNGSVNYDHGKDGRASEL
GGCSAEIRNREHDTYLAIRYSRGRLTVMIDVEDKNEWKECIDIGGVRLPTGYFFGASAAT
GDLSDNHDIISMKLYQLMVEHTPEEENLDWTKIEPSVSLLKSPKDNIDDPTGNFRGTPLT
GWKVFLLLLCALLGIVVCAVVGAVVFQKRQERNKRFY
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggggaactgcagagcatttctgagcacaacgctgctcttcttggtttcccgggtgtat
ccggtgtgctgtgacataacggacggaaacacggagcacctgaagagggagcactcgctg
atgaagccgtaccaaggggtcggcagcagcgccagcagccagtgggacttctggggaagc
acgttggtgacgagctcgtacgtccgactcactccggatgagaagagcaagcagggatcc
atctggaacacggtgccgtgccacctgaaggactgggagatgcacgtgcagttcaaagtg
cacgggtcggggaagaagaatctccatggcgacggcatcgccgtctggtacacgaaggac
cggctgcatccaggctctgtgtttgggaaccaagatcagtttcttggcctggctttgttt
gtggacaccttccgcaatgacctccatgggatggatcgctccttcccgtacatctcggcc
atggtgaacaacggctcggtgaactacgaccatggcaaagacggccgggcgtcggagctc
ggcggctgctcggcggagatccggaaccgcgagcacgacacgtacctcgccatccgctac
tccagaggacggctcaccgtgatgatcgacgtggaggacaagaacgagtggaaggagtgc
atcgacatcgggggggttcgcctgcccaccggctatttctttggagcctccgcggccacg
ggagatctgtctgataaccacgacatcatctccatgaagctctaccagctgatggtggaa
cacacccccgaggaggagaacctggactggaccaagatcgagcccagcgtcagcctcctc
aagtcccccaaagacaacatcgacgatcccaccggaaacttccgcggaacgccgctcacc
ggctggaaggtgttcctgctgctgctgtgcgccctgctgggcatcgtggtgtgtgccgtg
gtcggagccgtggtgttccagaagaggcaggagaggaacaagaggttctactga
DBGET
integrated database retrieval system
