Pseudoliparis swirei (Mariana hadal snailfish): 130209916
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Entry
130209916 CDS
T09868
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04080
Neuroactive ligand-receptor interaction
pswi04082
Neuroactive ligand signaling
pswi04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130209916
04082 Neuroactive ligand signaling
130209916
04519 Cadherin signaling
130209916
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130209916
Ion channels [BR:
pswi04040
]
Ligand-gated channels
GABA-A
130209916
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
130209916
NCBI-ProteinID:
XP_056295811
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All DBs
Position
19:complement(4997963..5026869)
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AA seq
455 aa
AA seq
DB search
MWSRKSAPPLLVCLLALTALWKTRSVNGNTTSDAFKTNITLFTRILDSLLDGYDNRLRPG
LGDRITEVKTNIYVTSFGPVSDTDMEYTIDVFFRQSWKDERLKFNGPMNILPLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVHAECPMHLEDFPMDFHSC
PLKFGSYAYTISEVNYEWTINASDSVVVERESSRLNQYDLLGQTVGQETIKSSTGEYKVM
TAHFHLKRKIGYFIIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSIVTEKKKERASV
MKKNNAYAVAVANYAPNIYKDSGALPTIAKGGASDPNKPREDGRVPDSKKTFNSVSKIDR
MSRVLFPVLFSSFNLVYWATYLSREPNIKNMVPSN
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcagaaagagcgctcctccgctcctcgtctgcctgctggcgctcacagctctc
tggaaaaccaggtcagtgaacggcaataccacatctgatgcctttaaaaccaacatcacc
ctgttcacgcgcatcctggacagcctgctggatggatacgacaaccgtctacggccgggc
ctcggtgacaggatcactgaggtgaagacaaacatctacgtcaccagcttcggaccagtt
tcagacacagacatggagtacaccatagacgttttcttccggcagagctggaaggatgag
aggttgaaatttaacgggccgatgaatattctgcccctcaacaacctgatggccagtaag
atctggaccccggacactttcttccacaatgggaagaagtccgtggctcacaacatgacc
atgcccaacaagctgctgaggatccaagatgacggcactctgctgtacaccatgaggttg
actgtgcatgcagagtgcccgatgcatctggaggatttccccatggactttcattcttgt
ccactcaaatttggcagctatgcgtacaccatctcagaagtgaattatgaatggactata
aatgcctccgactccgtggtggtggaacgagaaagctcccgcctgaaccagtacgacctg
ctggggcaaacggtgggacaggagacgatcaagtcgagtacgggtgaatacaaggtgatg
acggctcatttccacctgaagaggaagatcggctacttcatcatccagacgtacctcccg
tgcatcatgacggtcatcctctcccaggtgtctttctggctgaacagagagtcggtgccg
gcgaggaccgtgttcggtgtcaccaccgtcctcaccatgacgacgctgagtataagtgcc
aggaactccctccccaaggtggcctacgccaccgccatggactggttcatcgccgtctgc
tacgccttcgtcttctccgccctcatcgagttcgccaccgtcaactacttcacgaagcgc
ggctgggcctgggacgggaagagcatcgtgacggaaaagaaaaaagagcgggcgtccgtc
atgaagaagaacaacgcctacgccgtcgcggtggccaactacgcgccgaacatctacaag
gactccggcgcacttccgaccatcgccaaagggggcgcttcagatcctaacaagcccaga
gaggacggcagagtccccgacagcaagaagacgttcaacagcgtgagcaaaatcgaccgg
atgtcgagggttttgttcccggttctctttagcagcttcaacctggtttactgggccacc
tacttaagcagagaacccaatataaagaacatggtcccctctaattag
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