Pseudoliparis swirei (Mariana hadal snailfish): 130209918
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Entry
130209918 CDS
T09868
Symbol
atl3
Name
(RefSeq) atlastin-3
KO
K17339
atlastin [EC:3.6.5.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130209918 (atl3)
Membrane trafficking [BR:
pswi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
130209918 (atl3)
Autophagy
ER-phagy
ER-phagy recepters
130209918 (atl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
Oleosin
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
130209918
NCBI-ProteinID:
XP_056295815
LinkDB
All DBs
Position
19:complement(17936661..17945450)
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AA seq
511 aa
AA seq
DB search
MASKPGPVQIVTVCKEEHSFALDTEALARVLLAPEVRDKNVVVLSVAGALRKGKSFLLDF
MLRYMYRKGDDNWLGEDDEPLTGFSWRGGSEPETTGIQLWSEVFLIQKSDGTEVAVLLMD
TQGAFDNQSTVKDCATIFALSTMTSSIQIYNLSQNMQEDDLQQLQLFTEYGRLAMDEIFQ
KPFQSLMFLIRDWSFPYEYSYGFKGGNEFLDKRLQVNESQHEELQTVRDHIHSCFSNISC
FLLPHPGLKVATSPVFEGQLHAIAPEFKEELRSLIPKLLHPDRLCEKEINGNKVTCRGLL
EFFKAYIKIYQGEDLPQPKTMLMATAEANNLAAVATAKDQYSKNMERVCGGDLPYVAPDS
LEEKHQFNFREALHNFSKTKKMGGQEFCDRYQAELEKELEEMWQSLSKHNKAKNLFNAFR
TPAVLFVLVCLLYVVSGVLLFVGLSTVAVVCDCTLGVVMMSMLTWAFIRYSGRYQNVGGA
IDQAAGVVLEQATVVLNKSRGTATGDHKKSR
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaaaccaggcccagtccagatcgtcacagtgtgtaaggaggaacactccttt
gctttggacacagaggctttggctcgggtcctgttggcccccgaggtcagagacaagaat
gtggtggtgctgtcggtggctggagccttaagaaagggcaagagcttcctgcttgatttc
atgctccgctacatgtacagaaagggggacgataactggctgggtgaggatgacgagccg
ctgactggattttcttggagaggtggttctgaaccagagacaacaggcatccagctgtgg
agtgaagtgttcctcatccaaaagagcgatggaacagaggtggcagtattgttgatggac
acgcagggagccttcgataaccagtccaccgtgaaggactgtgccaccatctttgccctc
agcaccatgaccagctcgatacagatctacaatctgtcacagaacatgcaagaggacgat
ctgcagcagctacagctgttcacggagtatggtcgtcttgccatggatgagatctttcag
aagcccttccagtccttaatgttcctaatcagggactggagctttccctatgaatattcc
tacgggtttaaaggcggcaatgagttcctggataaacggttacaggtcaatgagagccag
catgaggagctacaaacagtgagggatcacatccattcctgcttcagcaacatttcctgc
ttcttgttacctcaccctgggttgaaggttgccaccagcccagttttcgagggacagctt
catgctattgccccggagtttaaagaggagctgaggagcctgatccctaaactgctgcat
ccggatcgcctgtgtgagaaagaaataaatggaaacaaagtcacttgcaggggcctgctc
gagttcttcaaggcttacatcaagatctaccagggagaagatctgccacagccaaagacg
atgctcatggctacagcagaggccaataatctggcagccgtggcaactgccaaagatcag
tatagcaagaacatggagagggtgtgcgggggagacttgccctatgtggctcccgactct
ctggaggaaaagcatcaatttaacttccgagaggctcttcataacttctccaagaccaaa
aagatgggcggacaagagttttgtgaccgttaccaggcagagctggaaaaagagctggag
gaaatgtggcagtcactcagcaagcacaacaaggcaaaaaacctcttcaacgccttccgg
acccctgcagtgctgtttgtcctggtgtgcctcctctatgtggtgtcgggtgtgttgctc
ttcgttggcctgtctaccgtcgccgtggtgtgtgactgtactctgggtgtggtcatgatg
tcgatgctgacgtgggccttcattcgctactctggtcggtaccagaatgtgggaggagcc
atcgaccaggctgcaggtgtcgtcctggagcaggccaccgtggtgttgaacaagtcgaga
ggtacggccactggtgaccataagaaatccagataa
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