Pseudoliparis swirei (Mariana hadal snailfish): 130209948
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Entry
130209948 CDS
T09868
Symbol
synj1
Name
(RefSeq) synaptojanin-1 isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00562
Inositol phosphate metabolism
pswi01100
Metabolic pathways
pswi04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
130209948 (synj1)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
130209948 (synj1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130209948 (synj1)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
130209948 (synj1)
Membrane trafficking [BR:
pswi04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
130209948 (synj1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Herpes_pp85
Motif
Other DBs
NCBI-GeneID:
130209948
NCBI-ProteinID:
XP_056295866
LinkDB
All DBs
Position
3:complement(5245857..5271469)
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AA seq
1683 aa
AA seq
DB search
MAFSKGYRIYHKLDPPPYSVIVETRSREECLMFESGAVAVLSAAEKDAIKNSYAKILDAY
GILGVLRLNLGDAMLHSLVVVTGCSSVGKVQDSEVFRVTQTDFISLKNDSGDEDRIAEVR
KVLNSGHFYFAWSATGVSMDLSLNAHRRILEDTTDNRFFWNQSLHLHLKHYGVNCDDWLL
RLMCGGVEIRTIYAGHKQAKACIFSRLSSERAGTRFNVRGTNDDGQVANFVETEQVIFLD
DRASSFIQIRGSIPLFWEQPGIQKKSIKGVLLHLNENRHRNWMDDNPHLVGSHRVKLSRG
FEANAPAFERHFTALRRLYGKQVIINLLGGKEGEHMLSKAFQSHLKASEHISAVKMVNFD
YHQNVKGGKADKLHSVLKPYLNKFIEECGFFYYSAETGIVRTQGGTIRTNCLDCLDRTNS
VQAFFALEMLPKQLEEMGLTEKPQLVARFQEVFRTMWSANGDSVSKIYAGTGALDGKAKA
GKLKDGARSVTRTIQNNFFDSSKQEAIDILRLGSTLNSDLADKARALLTTSSLYITEPIL
QSASPRVLLGMCQNHHKYTRPKQIRVGVGTWNVNGGKQFRSIAFRNQTLNDWLLDAPKKA
GHPEFQDSKANPIDIFAIGFEEMVELNAGNIVSASTTNQKLWAAELQKNLSRDHKYVLLA
SEQLVGVCLFVFIRPQHAPFIRDVAVDTVKTGMGGATGNKGGVAIRLLFHTTSICFVCSH
FAAGQSQVKERNDDYSEITRRLTFPMGRLLYSHDYVFWCGDFNYRISLPNEEVKELIKQQ
NWDALTVGDQLVDQKNAGLVFRGFIEGKLDFAPTYKYDLFSEDYDTSEKCRTPAWTDRIL
WKRRKWNFNMTVEEMNVVGSASTSGDNDDDPDNPWSPGTLKYYGRAELKTSDHRPVVSII
DVDILEVDSEARHQVYKEVIAQQGPPDGTILVSLCSSGPDDYFDDALIDELLDKFANFGE
VILIRFVEEKMWVTFLEGYSALAALSLSASTVLGKMMDIRLKSPGWIRSLEEEMSVDRIC
GSIPTSASSTLLAEDTDIGDDDYDMEGDVDEEVEEILPQHLQPGAGSGPGSSPLPSPRSS
PCNSPTHGEPVAPGRSSRGQPSRPSHGPPVDFQPGAPTSWEPKRPPPPRPHAPPARPAPP
QRPPPPSGPKSPALPRPEAAVARGQVAVGASGPGGAPRPNIPPRAGVISMPPQSRQLPPS
HPGAPRPIQEVHPGAPRPITDTHPGAPRPVPCGQVKPTDLPLSPPPSGPSPTEPPAARPQ
VPFPMQAPMQAPMQAPMQAPMQAPMQAPMQATMQAPMQPQPATPTAQSQPPPPMHPTLQA
PLQPAQAPNAGHPPPAAAPSAGSPQGLASPKPPPRSRSSHVLPPEAAKSETAAQTNGLNG
IQGEAQWMPGTFETPASDFSSSSSSSSSSWHSTQSLTRGSSLRAPPSVPAFTCASSSALP
PSFPLQPSARSVDSSSSSSAAPSQFASSSSSSLLPPPPVQSRSRSQETLHASPCPLPPDP
LPARPSSTNPFTGPLPQHRHRSLTPDFSAHRPASAFTPPLILTPAPAPTAAPAFQLQRSS
SPFGPSSTFPPAPSPAPSLPLAPASSLPPGLAPRRQPPPPTRRWVTFDNDLDFKPPTRTP
QAPAVPSSSLASQTQPSISAFDSEPDWLSSVPSVFPTLPPAIPSRTVNSNPKPPEGPGDD
DHS
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atggccttcagcaagggatatcgcatctaccacaagctggacccacctccctacagtgtc
atcgtggaaactaggagccgggaagaatgcctcatgtttgaatctggggctgtcgccgtt
ctgtcggcggccgagaaggatgccattaaaaactcatatgccaagattcttgatgcctac
ggcatcctgggcgtcctccgcctaaacctgggtgacgccatgctccacagtctggtggtt
gtgaccggatgcagctctgtggggaaggtgcaggattctgaggtgttcagggtcacgcag
acagacttcatatcgctgaagaacgattcaggagatgaggaccgcatcgccgaagtgcga
aaggtcttgaactcgggacacttctactttgcctggtctgccactggtgtcagcatggac
ttaagtctcaatgcacatcgcaggatcctagaggacacgacagataaccgcttcttttgg
aaccaatctctgcacctgcacctgaaacactacggagtgaactgtgacgactggctgttg
aggctgatgtgcggcggcgtggagatcaggaccatctacgcaggacacaaacaggccaag
gcgtgcatcttctcccgcctcagctcggagcgggccggcacacgattcaacgtccgaggg
acaaatgacgacggacaggtggccaactttgtggagactgaacaggttattttcctggat
gacagagcctcatccttcatccagatccgtgggtccattcctcttttctgggagcagcca
ggaatccagaaaaagtccattaagggtgttttgttgcacctgaatgagaatcggcaccgt
aattggatggatgacaacccgcacctggtcggttctcatcgcgtcaaactctcgagggga
tttgaggcgaacgcgccagcattcgaaagacacttcactgcactgcggaggctgtacggt
aaacaagtgatcatcaacctgctcgggggcaaggaaggggagcacatgctcagcaaagct
tttcagagtcacctgaaggcatcggagcacatatcagccgtgaagatggtgaactttgac
taccatcaaaatgtgaaggggggcaaagcggacaaactccacagtgtcctcaaaccctac
ctcaacaagttcatcgaggagtgcggcttcttctactactctgcagagacgggcatcgtc
aggactcaaggtgggaccattaggaccaactgcctggactgtttggatcgaaccaacagt
gtccaggccttctttgcccttgagatgctgccaaagcaactggaggaaatgggactgacg
gagaaaccccagctggtcgccaggttccaggaggtcttccggaccatgtggtctgccaac
ggagactccgtcagtaagatctatgcgggcactggcgccctggatggcaaggccaaggcg
ggaaagctcaaagatggcgctcgttccgtgacgaggaccatccagaacaacttcttcgac
agctcgaagcaggaggccatcgacatcctgaggctgggctccacgctcaacagtgatttg
gcggataaggctcgggccttgctcactacttccagtctttacatcactgagcccatctta
caatcagcctccccgagggtattgctgggaatgtgtcagaaccaccataaatacacgagg
cccaagcagatccgagtgggcgtcggcacctggaatgtcaacggggggaaacagtttcgc
agcatcgctttccgcaaccagacgctcaacgactggctgttggacgctccaaagaaggcc
gggcatcccgagttccaggatagcaaagcaaaccccatcgatatctttgccatcggcttt
gaggaaatggttgaactcaatgccggaaatatcgtcagtgccagcactacaaaccagaaa
ctttgggcggcggagctgcaaaagaacttgtcgcgggaccacaagtacgtgctgcttgct
tcagagcagctggtgggcgtgtgcctgttcgtcttcatccgcccgcagcacgcccccttc
atccgggatgttgccgtggatactgtgaaaaccgggatgggcggggctacgggcaataaa
ggaggcgtggccatccgcctgctcttccacaccaccagcatctgcttcgtctgctcccac
tttgccgccggccagtcgcaggtcaaggagaggaacgacgactacagcgagatcacgcgc
agactcaccttccccatgggtcgtctgctctactcgcacgactacgttttctggtgcgga
gactttaactatcgaatcagcctgcccaacgaggaagtcaaagagctaatcaagcagcag
aactgggatgccttgacagttggggaccagttggtggaccagaagaatgctggtttggtg
ttccgaggttttatcgaggggaagttagattttgctcccacctataagtatgacctcttc
tcagaagattatgacaccagtgagaagtgccgcacaccagcctggaccgaccgcatcctc
tggaagaggaggaagtggaactttaatatgacagtcgaggagatgaacgtcgtgggatca
gcttctacatcaggggacaatgacgacgatcccgataacccctggagtccgggcactctg
aagtactacggcagggctgagctcaagacctccgaccacagacccgtggtgtcgatcatc
gacgtcgacatcctggaggtcgactcggaggcgcgacaccaggtctacaaagaggtcatt
gcccaacaggggcctccagacggcaccatcctggtgtcgctctgctcctccggccccgac
gactacttcgacgacgctctcatcgacgagctgctggacaagtttgctaatttcggagag
gtcatcctcatcagatttgtggaggagaagatgtgggtgactttcctggaaggttactct
gctcttgctgctctgtctctcagcgcttccactgtccttggcaaaatgatggacatccgt
ctgaagagtccaggctggatcaggagtctggaggaggagatgagtgtggatagaatctgt
ggcagcatccccacctcggccagctccaccctcctcgccgaggacacggacattggcgat
gatgattacgatatggaaggggatgtggacgaggaggtggaggagatccttccccagcac
cttcagcccggagcaggctcagggcccggatcctccccgctcccctccccccgcagcagt
ccctgtaactcacctacccacggggaacccgttgcccccggcaggtcgagtcgtggacag
ccctcccggccatcacatgggcctcctgttgacttccagcctggtgcccccacatcatgg
gagcccaaacgccctcctcccccccgcccccacgcccctccagccagaccagcacctcct
caacgccccccgccaccttcaggaccaaagagccccgctctccctcggccagaggcagct
gtagctcgaggccaggtagcggtgggagcttctggacccggaggtgctcccagacccaat
atccctccccgggcgggggtgatcagtatgccccctcagtctcgccaactacctccctct
caccctggagcgcccaggcccatccaagaggtgcatcccggggcccctcggcccatcaca
gacacccaccctggagccccgcgacctgtgccctgtggccaggtcaaacccaccgacctg
cctctgagtccccctccctcaggaccgtctcctacagagccccctgcagcgagaccccag
gttccattccccatgcaggcccccatgcaggcacccatgcaggcacccatgcaggcaccc
atgcaggcccctatgcaggcccccatgcaggcaaccatgcaggcacccatgcagccccaa
cccgccacccctacagctcagtcccaacccccaccaccgatgcaccccacacttcaagct
cccctccagcctgcgcaagctcccaatgccgggcatcctcctcctgccgccgccccctct
gccggctcgccacaaggtctagcgtctcctaagccgccgccacgttcccgctcctctcac
gttctgccacccgaagctgccaagtctgagacggctgcgcagaccaatggactgaatgga
atccaaggagaagcacaatggatgcccggcaccttcgaaacacccgcttctgatttctcc
tcctcctcctcctcctcgtcgtcctcctggcacagcacccagtctctgaccagaggctcc
tctctgcgtgcccccccctctgttcccgcgttcacgtgtgcgtcctccagcgctctccct
ccatccttccctctgcagccctccgctcggtcagtcgactcgtcgtcgtcgtcgtccgcc
gccccgtcgcaattcgcctcctcctcctcctcctccctgcttccgcctcctccggtccag
tctcgtagccgctcgcaggagacgctgcacgcctctccctgccccctccctcccgacccg
ctcccagcccgaccgagcagcaccaaccccttcacgggcccgctgccgcagcatcggcac
cgctcgctcacgccggacttcagcgcccatcgccccgcgtctgctttcactcccccgctc
atcctcaccccggctccagccccgactgctgcccccgccttccagctccaaaggagctcg
tccccgttcggtccgtcatccacgttcccccccgccccgtcgccggccccctccttgccc
ctggcgccagcctcctcccttccgcctggcctcgcaccgcgtcgccagccacctcccccg
acccggcggtgggtcactttcgataatgatttggattttaaacctcccaccagaacgccg
caggctcccgccgtcccctccagttccctcgcgtcccaaacgcagccctccatctccgcg
tttgactccgagcccgactggttatcctcggtcccttcggtgttcccaaccctccctcct
gccatcccaagcagaactgtgaacagcaacccgaagcccccggagggacccggcgacgac
gatcactcgtaa
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