Pseudoliparis swirei (Mariana hadal snailfish): 130209957
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Entry
130209957 CDS
T09868
Symbol
hars
Name
(RefSeq) histidine--tRNA ligase isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
130209957 (hars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pswi01007
]
130209957 (hars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pswi03016
]
130209957 (hars)
Enzymes [BR:
pswi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
130209957 (hars)
Amino acid related enzymes [BR:
pswi01007
]
Aminoacyl-tRNA synthetase
Class II (A)
130209957 (hars)
Transfer RNA biogenesis [BR:
pswi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
130209957 (hars)
Prokaryotic type
130209957 (hars)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
WHEP-TRS
tRNA-synt_2
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
130209957
NCBI-ProteinID:
XP_056295880
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All DBs
Position
19:9388695..9398837
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AA seq
520 aa
AA seq
DB search
MLGMFCVRVCSGLMGFRAAPRSLHSFPGITVAQIDEEVAKLLQLKAQIGGDDGKHQFVLK
TAKGTRDYNPKQMAIRERVFSTIIGCFKRHGAETIDTPVFELKETLTGKYGEDSKLIYDL
KDQGGELLSLRYDLTVPFARYLAMNKITNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFD
IAGQYDAMIPDAECLKIVHEILSELDLGDFRIKVNDRRILDGMFAVCGVPYDKFRTICST
VDKLDKMPWEDVRKEMVNEKGLSEEAADQIGEYVSLQGGMELAERLLQDQKMSLSKQACA
GLSDIKLLFSYLQLFQATDKVVFDLSLARGLDYYTGIIYEAVLTQACVSTASTDAQNGAE
ESVSVGSVAGGGRYDGLVGMFDPKGRKVPCVGVSIGIERIFSIMEQKAEASAEKVRTTEV
QVMVASAQKNLLEERLKLVSELWNAGIKAELMYKKNPKLLSQLQHCEESGIPLVAILGEQ
ELKDGVVKLRVVASREEMRHGPNQERTHQIDVSKNWFWSF
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgctgggcatgttttgtgttcgtgtttgctctggtttgatgggctttcgggccgcacca
cggtctctgcattctttccctgggatcactgtggctcagattgatgaagaggttgccaaa
ctgctgcagctgaaggctcagataggaggagatgatggcaaacatcagtttgtcctcaag
acggcaaagggaacgagggactacaaccccaagcagatggccatcagagagagagtcttc
agcaccatcatcggctgcttcaaacgccacggagcagaaaccatcgacacgcccgtcttt
gaactcaaggagacgttgacggggaagtacggggaagattctaagctcatctacgacctg
aaggaccaaggaggagagctgctgtccctcagatatgacctcactgtgccctttgcccgc
tacctggcgatgaacaagataaccaacatcaagcggtaccacatcgctaaagtctaccgc
cgcgacaacccagccatgacccgcggacgctatcgagagttttaccaatgtgatttcgac
atagcagggcagtatgacgccatgattccagatgctgagtgtctgaagattgtccacgaa
atcctcagtgagctggatctcggagacttccggatcaaggtcaacgacagacgcattctt
gacggaatgtttgccgtgtgtggcgttccatatgacaagttccgcaccatctgttcaaca
gtggataaactggacaagatgccctgggaggacgtgaggaaggagatggtgaatgagaag
ggcctgtcggaagaggcggccgaccagatcggggagtacgtcagtttacaaggtggaatg
gaactagcagagcggctccttcaggaccagaagatgtctctgagtaagcaggcctgtgct
ggcctgtctgacatcaagctgctcttcagctacctgcagctcttccaggccacagacaag
gtggtgtttgacctcagtctggctcggggtctggactactacacgggaatcatttacgag
gcggtgctgactcaggcgtgtgtgtccacggcgtccaccgatgcccaaaatggggcggag
gagagtgtgagcgtgggcagcgtggccggcggcggtcggtacgacggcctggtgggcatg
tttgaccccaagggtcggaaagtaccgtgtgtgggcgtcagtatcggcatcgagaggatc
ttctccatcatggagcagaaggccgaggcctcagcagagaaggtccgtaccacagaggtt
caggtcatggtggcatcggctcagaagaatctgctggaggaaagactcaaactcgtctct
gagctctggaatgctggcattaaggccgagttgatgtacaagaagaaccccaaactgctg
agtcagctgcagcactgtgaggagtctgggatccccctggtggccatactgggagaacag
gagctcaaggatggagttgtgaaactccgcgtcgtggcctccagagaagagatgagacat
ggaccgaatcaagaaagaacacatcaaatagatgtttccaaaaattggttttggtctttt
taa
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