Pseudoliparis swirei (Mariana hadal snailfish): 130209959
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Entry
130209959 CDS
T09868
Symbol
frmpd3
Name
(RefSeq) FERM and PDZ domain-containing protein 3
KO
K23959
FERM and PDZ domain-containing protein 3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
130209959 (frmpd3)
Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
Other domain-containing proteins
FERM domain-containing proteins
130209959 (frmpd3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FERM_M
FERM_C_FAK1
RA_2
PEP-utilisers_N
Motif
Other DBs
NCBI-GeneID:
130209959
NCBI-ProteinID:
XP_056295886
LinkDB
All DBs
Position
19:complement(11509794..11528648)
Genome browser
AA seq
1569 aa
AA seq
DB search
MLKDDSLLLIPNVLKVFLENGQIKSFTFDNRTTVRDVISSLQDRLSLRYIEHFALVLEAG
GLDQNPRLHLLQESQPLTHVVHRTYFQGMKCLFRICFFPKDPADLLRRDPAAFEYLYIQS
RNDVIKERFGMDWKSDITLRLAALHIYITVSSARPNQKISLKHVEKEWGLEPFLPLTLLP
TVKEKNVCKSLSQLLKTYQHPPPSGNKVPPLQGKLQYMRVLNDLPPFGGILFHTVGLDEK
QSATTLLVGPRHGISHVIDLKNNLTTVLAEFSRVVKIQLYRESQGVARVEVTIHEAKPLV
LLMEWPDASNFACLISGYYKLFVDPKRTIYFRTPGQSQLTKADYRSSHHAHPRSGATSLP
SGGRRGDERESSHRESGSSRALVPAEPQHLGLCHVHLREQQQFQELQTHAEAELDINENF
ISHEPPWRPHTKSDATQQSTEEIADVLESPAVENAGFRIRAQTMRQSQKTSRYFCDSCKT
RHKAEGLSTAMNSSGSSGKHCSSACASRAGGAVDLMALQPPGIEEEEEANAGGEKLQPPP
PAIAAPPPGFRDNSSDEDDPKRGRKAQTSASPGVASGKLAQAKEDVLVTLIDNVATRTVR
DHAQELDDALVSTLQALEALAASEDYPHHPQQPTQTAGLIVLAAITPESSLDSGHETNSS
ELTDVSEVVSAMKQNQNKGYLLAHHINKEHILCRRDFPLAIPGCTAKTIGTGAFSVGQIR
VGCPPKQVILSKTVPFKVSPSPDSAGVRVVTEQGGNQETQTEQKEETEENLESTKANSPD
RPSKSTDELKVAGASLTAQVSKEQKLLNSSGETLSQNHSDGKMGKTTTPLITNPSNKALH
ILLPVERIASAKISPTNMCQDAKTASSETMKPSSSTELLPVDELFCTCSVQQEPGAQLRL
KDPKVQKIAVFQSSSPTDDERLQAKGLQLDNSKENEVRVGADPSLAKPTPQIQTKHSPHL
LVNAERREAAENKSESAPGKSHPESQKCPIKSLPILDDLTTPSPSVDKVSTLPVRDSKKQ
CSRKGKSPRSAPFLSFRNLLSATFPARMRRETDERRAQLQKVRQYELEFLEELLKPKSSQ
GEFLPQGSSPVPSGTPCACQLRTSPVIKAPGISREQRRSCDCKRMCRGMRLPDTPVGSTT
ETQHRGRERPISKTPPTVSKAPHIQGASRRPQTLEIKTTRIRSTSLESREPRGEQGSCLP
ICTSPTDCMGAPQYKTLQRRYSIGELDNSTSTAVYAEVKPKAKSLEKEMERVRATGLRLP
TPVEPVHSQSFQVEGKGKKGVFFIQGEELLRESKGTSEVPLTLPSEDSDDKDKCCSFCFC
YRKCEVADESSEKDELSYSIPLQVLPGIELDSHTFPVVSKMLHVLDAEDCSREEEEEEPQ
TQEIDLRACDTMEGSLARVQALQGNSFSLPDGFLNAQLDANELLAILRQCANSPQTEGEA
RLQPSQISEYKQELAVRFKEFRASCRRVASVEKSPTRMLAVVTTSFQVLCELTQTFIKLV
RGVRSETQRLQLLRKVEEVAINYTLLLRAAEESMGHSSSLPTKSVSPQVSSNTNNMSSLT
RPIKTLPEQ
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaggacgactccttgctactcataccaaatgtgttgaaggtgttcttggagaat
ggacagattaagtcctttacatttgataaccgtaccactgttagggatgtgatctcctcc
ctgcaggaccgcctctcactgcgctacattgagcactttgccttggtgttagaggcaggt
ggtttggaccagaacccaaggttgcatctgctacaggagagccagcctctgacacatgtg
gtgcatagaacctatttccaagggatgaagtgtctgttccgcatctgcttcttcccgaag
gaccctgcagacctgctgagaagagaccctgctgcttttgagtacctctatatacagagt
cgcaatgacgtcatcaaggaacgctttggcatggactggaaatctgacatcacgctacga
ttggctgcgcttcatatctacatcactgtgtcctccgcgcggcctaatcagaagatctct
ctcaagcatgttgagaaagagtggggactagagccttttcttcccctcactttgcttcca
acagtcaaggagaagaatgtgtgcaaaagcctgtctcagttgctgaagacctaccagcat
ccaccaccgtcgggaaacaaggtccctcctctccaaggaaagctgcagtatatgcgtgta
ctcaacgacctcccaccttttggtggcatactgtttcacactgttggactggatgaaaaa
caatcagctacaacactacttgtgggtcctcgacatggtataagtcacgttattgacctg
aaaaacaacctcacaacagttctggctgagttcagtagggttgtcaagatccagctctac
cgagaaagccagggagtggctcgtgtcgaggtgacaatccatgaggccaagcccctggtc
ctactcatggaatggcctgatgccagtaactttgcatgcctcatctctggctactacaaa
ctgtttgtagaccccaaacggaccatctacttccggacccctggtcagtctcagctgacc
aaagcagattacagaagctcccaccatgctcacccacgttctggggcaaccagcttgcca
agtggagggcgccgaggggacgagagggaaagctcacacagggagtcagggtcttcaagg
gccctagttccggccgagccccagcacctgggcttgtgtcatgtccaccttcgagaacaa
cagcaatttcaagagctccaaacacacgctgaagctgaactcgacatcaatgaaaacttt
atttcccatgagcccccttggcggccccacactaaatcagacgcaacccagcagagtaca
gaggaaatagctgatgttttagagagcccagcagtggagaatgcaggattcagaattcga
gcccaaacaatgcgtcaatcccagaaaacttcacgatacttttgtgactcctgcaaaacc
agacataaggcagagggtctgtcaacagcaatgaacagtagtgggagctcggggaaacac
tgctcaagtgcttgtgcctcccgagctggaggcgctgttgacctcatggcccttcagccc
ccaggaattgaagaggaggaagaggcaaatgctggtggagagaaattgcaaccaccacca
cctgctattgctgccccaccacctggcttcagggacaacagttcagatgaggatgaccca
aagagaggcaggaaggctcaaaccagtgccagccctggggtcgcctctgggaagctggcc
caagccaaggaagatgtgcttgtaacactaattgataatgtggccacaagaacagtccga
gatcatgcccaggagcttgacgatgccttggtgtctaccttacaggcactagaggctttg
gcagcctctgaggactacccccatcaccctcaacagccaacacagactgcagggctgatt
gtcttagctgccattacacctgagtcatcattggactcaggccatgagaccaactcttct
gaattaactgatgtttcggaggtggtgtcagctatgaagcagaaccagaacaagggttac
ctgctggctcatcacatcaacaaagaacatatactctgtcgccgtgactttcctctggca
atccctggctgcactgcaaagaccatagggactggggccttctctgtgggtcagattcgt
gttggatgtccacccaagcaagtaattctaagcaagacggttccctttaaagtcagtccc
agtccagactctgcaggagtcagagttgtaacagagcaggggggcaatcaagagactcag
acggaacagaaagaagagacggaagaaaaccttgagtccaccaaagcaaacagccctgat
cgcccttctaagtcaactgatgaacttaaagtggctggtgcttctttgacagctcaagtc
agtaaagagcagaagctattaaattcttctggggagaccttgagccaaaatcattcagat
ggtaaaatggggaagacaaccacacctcttataacaaaccctagcaacaaagccttacat
atcctcctacctgtggaaagaattgcctctgccaagatttctcccactaatatgtgccaa
gatgccaagactgcctctagtgagaccatgaagccttcaagctctacagaactgttgcca
gttgatgaacttttctgcacgtgctcagtgcaacaggagcctggggctcaactaagacta
aaagaccccaaagttcagaagatagcagtattccagtcctcctcccccacagatgatgag
cgtcttcaggccaaaggccttcagcttgataacagcaaagaaaatgaagtgagagtagga
gcagatcctagcttggcaaaacccacccctcaaatacaaaccaagcattcccctcatttg
cttgtaaatgcagagagaagagaggcagctgaaaacaagtctgagagtgctccgggcaaa
tcccaccctgagtcacaaaaatgtcccataaaatcgttacctattttagatgatctgaca
acacctagcccctctgtagataaagtctccactctccctgtcagagactcaaagaagcaa
tgtagtaggaaggggaagtccccgcgcagcgctcctttcttgagctttagaaaccttctt
tcagctaccttcccagcacgaatgcgaagagaaacagatgagcgaagggctcagttgcag
aaagtccggcagtatgaattagagttcttagaggaactgctgaaacccaagtcatcccaa
ggagaatttttgccacagggatcctcacctgtgccctcgggcacaccctgtgcctgccaa
ctccgcaccagccctgtaataaaggctccaggtatatccagggagcagcgacgaagctgt
gactgtaagagaatgtgtaggggcatgcgactacctgacacaccagttggatccacaaca
gagacacaacacagaggtagagagagacctatctctaaaacccctccaaccgtctccaaa
gcacctcatatccaaggtgcttcaagaagacctcagactttggagattaagaccacacga
atacgctctaccagtctggagtcaagagagcctaggggagagcagggttcctgcttgccc
atctgtacttctccaaccgattgcatgggagcaccacaatacaagacgctccagaggcga
tacagcattggagagctggataacagcactagcacggctgtgtatgctgaggtgaaaccc
aaagccaagagtctagagaaagagatggagagagtgagggccacagggctgaggctcccc
accccagtagagccggtccacagtcagtctttccaagtagaggggaagggtaaaaagggt
gtatttttcattcagggagaagagctattgcgtgaaagtaaagggactagcgaggtgccg
ctgaccctgccgagtgaagacagtgatgacaaggataaatgctgctcattctgtttctgc
tacaggaagtgtgaggtcgcagatgaaagcagtgaaaaggatgagctctcatactccata
cctcttcaggtccttccaggcatagagttggactcgcatacctttcctgtagtcagcaaa
atgctccatgttcttgatgcagaggattgcagtcgtgaggaagaggaggaggagccacag
acacaggagattgacctgagagcctgtgatacaatggaggggagccttgcacgggtacag
gctttacagggaaacagtttcagcttgcctgatggtttcctaaatgcccagttggatgct
aatgagttactcgctattctgcgtcagtgtgccaacagcccccaaactgagggcgaggct
cgacttcagccctcacagatttcagagtacaaacaggagctggcggtgcgattcaaagaa
ttcagagcatcttgtcgacgagtggcaagtgttgaaaaaagcccaacacgtatgcttgct
gttgtcacaaccagctttcaagtgttgtgtgaactaactcagaccttcatcaaattggtt
aggggggttcgttcagaaacccaaaggctgcagctgttgagaaaggttgaggaagtagct
atcaactacacgttgcttctgcgcgcagcagaagaatcaatggggcactcgagcagcttg
ccgacaaaatcagtgagccctcaagtttcctccaacacgaataacatgagctcacttact
cgacccatcaaaactctgccggaacagtaa
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integrated database retrieval system
