Pseudoliparis swirei (Mariana hadal snailfish): 130209973
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Entry
130209973 CDS
T09868
Symbol
gpc3
Name
(RefSeq) glypican-3
KO
K08109
glypican 3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pswi00535
]
130209973 (gpc3)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pswi00537
]
130209973 (gpc3)
Proteoglycans [BR:
pswi00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
130209973 (gpc3)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pswi00537
]
Others
130209973 (gpc3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
Motif
Other DBs
NCBI-GeneID:
130209973
NCBI-ProteinID:
XP_056295908
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Position
19:4459048..4565802
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AA seq
579 aa
AA seq
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MLVVSVRGALFLCALLQLFSLPSAQVPTCQEVRTAFQSLHPGSKWVPEAPVSGADLQVCQ
TKGPTCCSKKMEERYQVAARSNMESGLQAVSAQLKRLIIQNAAIFQEAFDLVLRHGRNFT
LAMLKAEFPGLGGGARSSVGQLFLDLSLYILGSDSTVDHMVAVLYGRLFPLAYRHLLGGG
TSSASEECVRGAWKDSGAFGPYPKLMMTRLSRSLLATRVFLQALNLGIEVVNTTDHLRPG
RDCGRSLLRLWYCPHCQGLLGPPACRGFCQAVMHGCLGGAAEVQPHWRSYVDGLGKLAGA
MRGERDMEAVVLRLPSMIKLALRHAVGARARLTALVSGMCGNTPQRASRSAGSSPPSPPH
PPPPPPAARDAPDSDETLLGLRREFISNLKGFSSFYSGLGEALCSREPAPENHSLCWNGQ
EMTDRFPGPGLKRSHPGSESRSNKPPEPIISQIIDKLKHINQLLRLVTASDKRWRARSRG
ADAWGDEEDGFESGDCDDEDDECAGVSGLGPPPRRKRLRIFADLADNLAMDDFAFQEQLL
TPRLATAGGASSPAAPLWRSRPVPALPLTLALLLLLRPH
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgctcgttgtatcggtgcgcggggcgctcttcctgtgcgccttgctccagctcttctcg
ctgcccagcgcacaggtgccgacctgccaggaggtgcgcacggcgttccagtctctgcat
ccgggctccaagtgggtccccgaagccccggtgtcaggtgcggatctgcaggtgtgccaa
accaaaggcccgacctgctgttccaagaaaatggaggagcgctatcaggtggcggcgcgg
agcaacatggagtcgggtctgcaggccgtcagcgctcagctcaaacgcctcatcatccag
aacgccgccatattccaagaggccttcgacctggtgctgcgtcacggccgcaacttcacg
ctggccatgctgaaggcggagttccccggtctcgggggcggagcccggagctccgtgggg
cagctcttcctggacctgtcgctctacatcctgggctcggactccaccgtggaccacatg
gtggcggtgctctacggccgcctcttccctctggcctaccgccacctgctgggcggcggc
acgtcctccgcgtccgaggaatgcgtgagaggggcctggaaggactccggagcgttcggc
ccgtaccccaagctgatgatgacccgcctgtcccgctccctgctggccacgcgggtcttc
ctgcaggcgctgaacctgggcatcgaggtggtcaacaccaccgatcacctgcggcccggc
cgggactgcggccgctccctgctgaggctgtggtactgcccgcactgccagggcctgctg
gggccgccggcctgccggggcttctgccaggccgtgatgcacggctgcctggggggcgcg
gccgaggtgcagccgcactggaggagctacgtcgacgggctggggaagctggccggagcc
atgaggggcgagcgggacatggaggccgtggttctcaggctgccttccatgatcaaactg
gccctgaggcacgccgtgggcgcccgcgcccgcctcaccgccctggtgagcgggatgtgt
ggaaacactcctcagcgcgcctcccgctcggcgggctcctcccctccgtcacctcctcat
cctccgccgcctcctcccgcggcccgcgatgccccggactccgacgagactctgctcggc
ctccgcagggagttcatatccaacttgaagggcttcagctccttctacagcggtctcggg
gaggcgctgtgcagccgcgagcccgctccggagaaccactccctctgctggaacggacag
gagatgacagacaggtttcccgggccgggcctgaagagatcgcaccccggctccgagtcc
agaagcaacaagccccccgagccgatcatcagccagatcatagacaaactcaaacacatc
aaccagctgctgcggctggtgaccgcgtccgacaaacggtggagggcccggtcgcgggga
gcggacgcctggggcgacgaggaggacggattcgagagcggcgactgcgacgacgaagac
gacgagtgcgccggagtgtccgggctcgggccgccgccgagacgcaagcggctacgcatc
ttcgcagacctggccgataacctggcgatggacgacttcgccttccaggagcagctgctg
acccctcgcctggccacggccggcggcgcctcctcgcccgccgcgccgctgtggaggagc
cgcccggtccccgcgctcccgttgacgctcgccctgctcctcctgcttcgtccccactga
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