Pseudoliparis swirei (Mariana hadal snailfish): 130209984
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Entry
130209984 CDS
T09868
Symbol
nexmifb
Name
(RefSeq) neurite extension and migration factor isoform X1
KO
K25862
neurite extension and migration factor
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
130209984 (nexmifb)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4683
Motif
Other DBs
NCBI-GeneID:
130209984
NCBI-ProteinID:
XP_056295927
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All DBs
Position
19:complement(11846093..11910988)
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AA seq
1429 aa
AA seq
DB search
MDVLTDSSLTLIVKTSEPDNANVLENTGVSEQSGHLRLCGIVDAALPPSSPPPAAETSQP
ACPTHQRNTSTSPKLTLPLSTGNSLGLTVTPCPPSDDAPTVVSQLHHTPTPLPTPALSSW
GPTGDTQKTSLLLPVALPLSATMMEPATVSALTEECILQPTSTCLGCFIETRDATDPNSI
QNPPHDPNTNPDTETGLSVRIGDVSREDFSDINNISIQCLSHAGEAVSHYGEQLLSDQLL
SFPLPKASGEGKRADGNKTTEDCDDPEDDATAKNLYEGLLLDKVSGEEVLLANAGQDWGY
FESFISESKMELLDLCSKNELSVNLFSEEDVDNLFDDEDDDSTLSSDVCSLKIRYESFQD
NMREKTNVLQEETQFNFFPSVLANCAKKEEGAGVLRRSAEELQLKTDELILETGQEGKAG
DCSGKSPLNGSQGSPMSTPKVNYLMDFNSTEESGEFSDDSSCTGSSSDTLQEGKLKKGHS
KRLLSPSNPLNYGLRSKRKVRYSDDYLYDVDSLESEKNAEKKEKAPSGQKEEEDVDWCPK
KRRKSSRKEPPVVIKYIIINRFKGERLMSVKLGKLDPVDSTVTLNTDTVSKYETLSPFKD
FWQVKQRERQEQLKLAARDKQQRGFHLNGRHHRPFNSSHPKRKYKIANRLKVQRIHAVDQ
SATVQCTPLSDRGQGGVTKEDTNPTVGGIIAVPDLPVTLDSITHAVTAKSRSQEREEREG
RRLGGNKTVRIRKFKSEARLRSKKIKEAEGEEGRSVTIETEACVAAPQIGDPAAGLEEAR
ISSVTVKPHLSDNTTTAHASEEKFPFVTSCSPDKAPPSEAVESGVPVIPGGYLQTLLDAT
DSPSGATISYFPQQPSRQRYPLRLSLEEKQFSSLQLAQSCVLSPPSESELQQSPQNCPNF
TQMWHPQRCASHSQNFGPETPETPILPSNFPAVVPLNDSMPVSNYSQLSPETDRLLYEKS
YLTEAGLQPGADLQVCQSACVEGQVQYQRGSLCTDNGRLISYDSVGSLSASSSNYSSLSL
KSCEREGEEEGRDSFLAHCSPKVVIQQSMDALTPLRESSDLLDISNFTPDKFRHSLLSEL
SPPETPNLSPQVVGRDMKMAGNTGEYQDVNDMTMDCNREVKWNCDVMQQQEHTTNAYTVE
DSQFPLHNFSSQDVLRLDKKELGVNEFNEQTGEMLTGAKSIKSKRKGNCKQTAAGQSPKK
VRAPRAPKLEKAKTPKQNSRSTKKIKAMLEGKAAKNQAGGCGTGLNDSSSTGDWSGTGWS
ESNSLVGDDQREFEEPSNILSNIVSGMAEVQRFMMASIEPLWNPMSDSCMPSEANSLNLK
TLKILAGTEADLKKKGAALTGAGRGRKAGGKGGKNQAKFNPSHPLFPQLALGCNMFDKPN
FINPGPAHKKLYRHKTSAKFPRIETLKGKRAERDPNKDIALMTSFEKLR
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgttaacagacagcagtctcacattgatcgtgaagacttcagaaccagataat
gcaaatgtactggagaacacaggggtaagtgagcagagtggtcatctgagactttgcggc
atcgttgatgctgctctccctccatcctcacctccacctgccgcagagacttcacagcca
gcctgcccaacacaccagaggaacacgtctacatcacccaaactcaccctgccccttagc
actggcaactctctgggcctaacagtgaccccctgcccgccctctgatgatgctccaact
gtagtctctcaacttcaccacactcccacaccacttcccaccccagctctaagctcctgg
ggtccaacaggagacactcagaagacttctcttctgctgcctgttgccctccctctgtca
gctacaatgatggagcctgccactgtgtctgccttgacagaggagtgtattcttcagcct
accagtacctgccttggctgcttcattgagacccgtgatgccactgaccctaattccatc
cagaatccgccccatgaccctaacaccaaccctgacacagagactgggctaagtgtaagg
ataggcgatgtgagcagagaggacttctctgacatcaataatatcagcatccagtgcctg
agccatgcaggggaggcagtgagtcactatggagaacagctcctctctgaccagctactt
agctttcctctgccgaaagcctcaggtgagggtaagagagctgatgggaacaaaacaaca
gaggactgtgatgacccagaagatgatgcaacagctaagaacttgtatgagggactgtta
ttggacaaagtgagtggagaggaggttctgctggcgaacgccggccaggactggggctac
tttgaatccttcattagtgaaagtaagatggaactgctggacctttgttctaagaatgaa
ctgtcagtcaacctcttctctgaggaagacgttgacaatctatttgatgatgaagacgat
gattccactttaagcagtgatgtatgttcgctgaagattcgttacgagtctttccaggac
aacatgagggaaaagacaaatgtgctccaggaggagacacagtttaacttcttccctagt
gtcctggccaactgtgccaagaaagaggaaggagctggcgtcttaaggaggagtgctgag
gagcttcagcttaaaactgatgagctcattcttgagacaggacaggaaggaaaggctggg
gactgcagtggtaagagtccccttaatggttcccaaggctcaccaatgtcaactcccaaa
gtcaactacctaatggacttcaattccacagaggagtcaggcgagtttagtgacgacagc
tcctgcactggctcctcctcagacaccttgcaggagggcaagcttaagaagggccactca
aaaagattgctcagcccctctaaccccctcaactatggtttgcgctccaagagaaaagtt
cgatacagtgatgattacttatatgatgttgactcgcttgaaagtgagaagaatgcagag
aaaaaagagaaagctccgtctggtcaaaaagaggaggaggatgtagactggtgccccaaa
aaacgacgaaaatcctctcgtaaagagccgccagttgtcatcaagtacatcatcatcaac
aggtttaaaggggagagactcatgtcagtgaaactgggcaagttggaccctgtggactct
actgtgaccttaaacactgacacagtaagcaaatatgagacactgtctcctttcaaggat
ttctggcaggtgaagcagagagagagacaggagcagcttaagctggctgccagagataaa
caacaacgtggttttcatctaaacggacgccatcatcgcccttttaattctagtcatccc
aaaaggaaatataagattgcaaacaggcttaaggttcagagaattcacgctgtggatcaa
tcagcgacagtacagtgcacccctctttctgatcggggccagggaggtgtcactaaagaa
gacaccaaccccacggtagggggaataatagcagtcccagacctcccagtcacattagac
tccatcacgcacgcagtcacagctaagagtcgctcccaggaaagggaggaaagggagggg
aggagattgggaggaaataaaacagtcaggataaggaaattcaaaagcgaagccaggctg
agaagcaagaaaattaaagaggcagaaggagaggaggggaggagcgtgacaatagaaacg
gaagcctgtgtcgctgcaccacagattggggaccctgctgctgggttagaagaggcaaga
attagctcagttacagtcaaaccccatctctctgacaataccaccaccgctcacgcatct
gaggagaaattcccctttgtgacctcctgctctcctgacaaagctcctccctcagaggcg
gtggagtcgggtgtccctgttatcccggggggctacctgcagaccctgttagatgctaca
gactcacccagtggagcaactatctcttatttcccccagcagccctctaggcaacggtat
cctctgaggctatccctagaggagaaacagttttcttctctgcagctcgctcagagctgc
gtcctctctcctccctcggagtcagagctccagcagtctccccaaaactgcccaaacttc
acccagatgtggcacccgcagcgctgtgcaagtcacagccagaactttggacctgagacc
cctgagactcccattttacccagcaacttcccagctgttgtacccctgaatgacagcatg
ccagtgtctaactacagccaactgagcccagagactgacaggctactttatgagaagagc
tacctgactgaggcaggtctgcagcctggggcagatctgcaagtgtgtcagtctgcttgt
gtggagggccaggtgcaataccagagagggtccctctgcacagacaatggcaggctcatc
agctatgactcagtaggctctctgtcagcctcctccagcaattacagctccctcagtctc
aagtcttgtgagcgagagggtgaggaagagggccgagacagctttttagctcattgtagt
cctaaagtggtgattcagcagagtatggacgcccttaccccactcagggagtcctcggac
ctgctggacatctccaacttcacccccgacaagtttagacactcattactgtcagagctc
tcccctcctgagacccccaacctgtccccccaggtggtgggacgtgatatgaagatggca
gggaatactggagaataccaggatgtgaatgacatgacaatggactgcaacagggaggta
aagtggaactgtgatgttatgcagcaacaagagcacacaacaaatgcatacacagtggaa
gatagccagtttccgctgcacaacttcagcagtcaggatgtgttacgtttggataaaaaa
gagcttggagtgaatgaatttaatgaacagactggtgagatgttgactggtgcaaaaagc
attaagtcaaagaggaaaggcaattgtaaacagacagccgcaggacagagccctaagaaa
gtccgggctccacgagctccgaagttagaaaaggcaaagacccccaaacagaactcacgt
tccaccaaaaaaataaaggccatgttggagggtaaggcagcaaagaaccaggcaggcggt
tgtggcacaggcctaaatgacagtagcagtactggggactggtctggcaccggttggtca
gagagcaatagcctggttggggatgaccagagagaatttgaggagccatccaatattctg
tccaacattgtctctggcatggctgaggtccaaaggttcatgatggcctccattgagcca
ctttggaatcccatgtctgattcctgcatgccctctgaggccaatagcctcaacctaaag
actctcaaaatcttggcaggcacagaggccgacctgaagaaaaaaggagccgcgctaacg
ggggctgggagaggccgaaaggcagggggaaagggaggaaagaaccaggccaaattcaac
ccctctcaccccttatttcctcaactagctcttggctgtaacatgtttgataaacccaac
tttattaaccctgggcctgcacacaaaaagctgtaccgccacaagaccagtgcaaagttc
ccacggattgagacactgaaggggaagcgagctgagagagacccaaataaggacatagca
ctgatgacctcgtttgagaaactgaggtaa
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