Pseudoliparis swirei (Mariana hadal snailfish): 130209992
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Entry
130209992 CDS
T09868
Symbol
gabra4
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04080
Neuroactive ligand-receptor interaction
pswi04082
Neuroactive ligand signaling
pswi04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130209992 (gabra4)
04082 Neuroactive ligand signaling
130209992 (gabra4)
04519 Cadherin signaling
130209992 (gabra4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130209992 (gabra4)
Ion channels [BR:
pswi04040
]
Ligand-gated channels
GABA-A
130209992 (gabra4)
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Ortholog
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
130209992
NCBI-ProteinID:
XP_056295941
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All DBs
Position
19:complement(5042014..5055740)
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AA seq
557 aa
AA seq
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MVSAQKKKEPATAMWPAWIRTLLYFFCLATCVKKISGQTKKDERIYPENFTRILDRLLDG
YDNRLRPGFGESVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDRRLMYEGSIEILR
LNNLMVTKVWTPDTFFRNGKKSVAHNMTAPNRLFRIMKNGTILYTMRLTIRAQCPMKLVN
FPMDGHACPLKFGSYAYPKTEIIYTWTKGPQHSVVVPPESSSLVQYDLIGQTVSSETIKS
ITGEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLT
MTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNAQMERAKKKPAKC
PPVPQTTPVKVKDTGEALQIPDSNGNLRKRMNYISHQEASSHQRATSTTNMSGVGRARVL
RPLVGGVNGGSSALSRSGPKSESLLSVASSSAQLVNIAPPQAAASTPDVMAATPCKQDAD
SSSLQHLLGPKLERIHMMGNRLEPKQTPCSQPTAAGMGGTSKIDKYARILFPVSFGAFNM
VYWVVYLSKDTMVATGG
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgcccagaagaagaaggagccggccacagcgatgtggcccgcgtggatccgg
accctcctctactttttctgtttggccacttgtgtgaagaaaatctctggacagacaaaa
aaggatgaaaggatctatccggagaattttactcgcattctggaccgacttctggacggc
tacgacaacaggctgcgaccgggattcggggaatccgtgacggaggtcaagacggacatt
tatgtgaccagtttcgggcccgtctcggatgttgaaatggagtacacgatggacgtgttc
tttcggcagacgtgggtggaccggaggctgatgtacgaggggtccatcgagatcctgcgg
ctgaacaacctgatggtgaccaaagtgtggacgccggacaccttcttcaggaacggcaag
aagtccgtggctcacaacatgacggcccccaacaggctcttccgcatcatgaagaacggc
accatcctgtacaccatgaggttgaccatcagagcccagtgtcccatgaagcttgtgaac
ttccccatggatggacatgcgtgccccctcaaatttggaagctatgcttatccaaaaaca
gagatcatctacacgtggaccaaagggcctcagcattccgtggtggtccctcccgagtcc
tccagtctcgttcagtacgatctcatcggacagacggtctccagcgaaaccattaaatcc
atcacaggtgaatacgtggtgatgacggtctactttcacctgaaacgtaaaatgggctac
ttcatgatccagacgtacatcccctgcatcatgacagtcatcctctcccaagtgtccttc
tggataaataaagaatcggtcccggcgcgcacagtcttcggcatcaccacggtcctcacc
atgacgacgctcagcatcagcgcccgccactcccttcccaaggtctcctacgccaccgcc
atggactggttcatcgccgtctgcttcgccttcgtcttctccgccctcatcgagttcgcc
gccgtgaactacttcaccaacgcgcagatggagcgcgccaagaagaagccggccaagtgt
cccccggtgccccaaaccacgcccgtcaaggtcaaggacacgggggaagcgctgcagatt
cccgacagcaacggcaacctgagaaagcgaatgaattatatctcccaccaagaggccagc
agccaccagagagccacgtccaccaccaacatgtcgggggttggccgagcgagagtgcta
cgacctttggtcggcggggtcaacggcggctcctccgccctctcgcgctccggccccaag
tccgagagcctcctcagcgtggcctcctcctcggctcagctggtgaacatcgcgccgccg
caggctgcggcgtccacgccggacgtaatggcggcgacgccgtgcaagcaggacgccgac
tcatcgtccctgcagcatctgctggggcccaagctggagcgcatccacatgatggggaac
aggctggagcccaagcagacgccgtgctcccagcccaccgccgccggcatgggaggaacc
agcaaaattgacaagtacgctcggatcctgttcccagtgtccttcggggcttttaacatg
gtctactgggtggtctacctgtcaaaggacacaatggtggcgacaggtggctag
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