Pseudoliparis swirei (Mariana hadal snailfish): 130209996
Help
Entry
130209996 CDS
T09868
Symbol
flrt1b
Name
(RefSeq) leucine-rich repeat transmembrane protein FLRT1
KO
K16362
leucine-rich repeat transmembrane protein FLRT
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
130209996 (flrt1b)
Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
130209996 (flrt1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRRCT
fn3
LRR_9
LRR_LRWD1
LRRCT_2
LRRNT
Motif
Other DBs
NCBI-GeneID:
130209996
NCBI-ProteinID:
XP_056295950
LinkDB
All DBs
Position
19:17623246..17626219
Genome browser
AA seq
732 aa
AA seq
DB search
MAAESIAELRDWLFLLLLCLTLLAEVLELAAAAIAMETGEGDEGIVCPIVCRCDEGFVYC
NDRGLSIIPPLPLMAAILYLQSNRLSNAGLPPTLERSTSIRVIYLYANQLDEFPIHLPPS
LRELHLQDNNIRTLPRSALAKLPLLERLHLDDNSISTVSIQERAFSGTPRLRLLFLSRNH
LSSIPAGLPASLEELRLDDNRISTIPTHAFRGLSSLRRLVLDGNLLANTRIADDTFSRLS
NLTELSLVRNALQSLPVYLPSAHLVRLHLQDNGMTHIPRGALDGMRRLQRLDLSGNNLTT
LPRGLLKDTESLELLLLRGNPWYCGCNLRWLHAWLHSRGAAVTVRGLTCQGPEPVRGQAV
RELTSMMEQCEGPAAGPSTGMGMNPAEKDRGGEDGVGGGQAVASVAHGSTTTTSLLVPTQ
GSLFTLRAKRPGLVMPLPPGEGGQVSGEALELTVKPLSSDSVLVSWLCPQPAPSFRLSWL
RLGSSAALGSITETLVPGERRQYHLTQLTPRSHYLICLLPLRQESSFGGSSMGLSRVGSM
DIDSKDSAPSCAQIETGEALVNTDGEGSDKEGQDLELTALPLAGIIGGATALVSLLLIFG
IFCWYGQRTSYVSGDSGSYSRGRGGKHYDDYVESGTKKDTSILEIRSPPAGFQMTAMAHQ
PLQPKLEDVTYIHTIFPSSSSSSQANGTYRSSHAVGSLNGTILSQTSHHHATYGTNRGYR
EGGIPDIDYAYT
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgagagtattgctgagctccgcgattggctctttctgctcctcctgtgcctc
accttattggctgaggtgctggaactggcagcagcggcaattgccatggagacgggcgag
ggagatgagggcattgtttgtcccatagtgtgccgctgtgatgagggttttgtctactgc
aacgaccgtggcctcagtataattcctccactaccattaatggctgccatcctctacttg
cagagcaaccggctgagtaacgctggcctacctcccacactggaacgcagcacttccata
cgagtgatttacctgtatgccaaccagttggatgaattccctatacacctcccgccttcg
ttacgggagctccatttgcaggataacaatatacgaacgttaccgagatcagctctggcc
aagctcccattactagaacgattgcacctggatgataactctatatccacagttagcatc
caggagagagctttttccgggacaccacggcttcgacttctgtttctgtctcggaaccac
ctatcaagcatccctgcaggcttgccagcatccttggaagagttacgacttgacgacaat
agaatcagcactatccccacacatgccttccgtgggctctcctccctgcgacgcctcgtc
ctggatgggaacctgctggccaacacacgcattgcagatgacaccttctcccgtctctcc
aacctgactgagctgtcactggtcaggaatgcgctacagtctctgcccgtctacctacca
tcggctcaccttgtgcgactccatttgcaagacaacggaatgactcacataccacggggg
gcgctggacgggatgcggcggctacagaggctggacctgtctggaaacaatctgaccact
ctcccacgaggacttctgaaggatacagaaagcctagagctgctactgctgcgaggaaac
ccctggtattgtggctgcaaccttcgctggctccacgcatggctgcacagccggggggca
gcggtgacagtcaggggtctgacctgtcaggggcctgagcctgtaagagggcaggccgtc
agagaactaacctccatgatggagcagtgtgaaggccctgctgctggtcctagtactgga
atggggatgaacccagcagaaaaagatcggggtggtgaagatggtgttggtggaggccaa
gcagtggcttcagtcgcccatggtagcaccaccacgacctccctgctggtccccacacaa
ggttccctcttcaccctgcgagccaagcgaccgggacttgttatgcctctgcctcctggg
gaagggggacaggtctctggagaggccctggagctgactgtaaaacctctctcttcggac
agtgtactggtaagctggctgtgtccacagccggcaccctccttccgcttatcttggctg
aggttgggtagcagtgcagctcttggctccataacagagactctggtacctggagagagg
aggcagtaccatcttacccagcttaccccacggtcccattacctcatatgtctgctgcca
ctacgacaggaatcctcctttgggggttccagcatgggtttatctcgagttggcagcatg
gacatagacagtaaagactctgccccgtcctgcgctcagatagaaactggagaggcactg
gtcaacacagatggggagggttcagataaagagggacaggacttagaactaacagccctg
ccattggctgggatcattggtggtgccacagcattagtaagcttgctgttaatctttggc
atcttctgctggtatggacagagaacaagttacgtgtccggtgactcaggctcgtacagc
aggggccggggtgggaaacattatgatgactatgtagagtcaggtaccaagaaagacact
tccatcttagagatcaggtcccctcctgcagggtttcagatgacagctatggcccatcag
cccctgcagcctaagctggaggatgtcacctacatccacaccattttcccctcctcttcc
tcttcttcccaagctaacgggacctaccggagcagccacgcagtcggcagcctcaatggc
accatcctcagccaaaccagccaccatcatgccacttatggtaccaaccgaggctacaga
gagggtggcatccccgacatagattatgcctacacgtga
DBGET
integrated database retrieval system
