Pseudoliparis swirei (Mariana hadal snailfish): 130210004
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Entry
130210004 CDS
T09868
Symbol
nkx1.2lb
Name
(RefSeq) NK1 transcription factor-related protein 1
KO
K09309
homeobox protein Nkx-1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130210004 (nkx1.2lb)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
130210004 (nkx1.2lb)
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GFIT
Motif
Pfam:
Homeodomain
Motif
Other DBs
NCBI-GeneID:
130210004
NCBI-ProteinID:
XP_056295959
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Position
19:complement(10960535..10966920)
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AA seq
402 aa
AA seq
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MNRDRAVTEPGADTVQPVMSRDRALPAPGGDGVQTVVSPDNGDMLNRGAAGEKRLFSNTV
AGSRDAQAVENHLETPPTNPVLAPAQQGPTGHRTTSFSVLDILDPNKFTSSRRQQQHASH
GGERELNAYGAENRRGGTGECEASLEPSKGCYGAEEYQSKEGFVYRSHDEDDYHRSGTPD
SEAPDGPYSSEESSSALPSSGDRDLGQHSIQDHGRETKSPGGGPTGQLADVQANGGQETQ
GKPKRKRSGSDSKSGKPRRARTAFTYEQLVALENKFKSTRYLSVCERLNLALSLSLTETQ
VKIWFQNRRTKWKKQNPGADTSAPTGTGGGGGLGGGLGGLSPLSTSPPISGHLAMHAGYA
GHHHPPTGSLVQLPFLTASHVLSPFMLGTQSYAAPAFYSTHL
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgggacagagcggtaacggagcccggagcggacacggtccagcccgtgatgagt
cgggacagagcgctaccggcacccggcggtgacggggtccaaaccgtggtgagcccggac
aacggagacatgctgaacagaggtgctgccggagagaagcggctcttttccaacactgta
gcgggaagcagagatgctcaggccgtggagaaccacttggaaactccaccgactaacccg
gtgttagccccagcacagcagggccctaccgggcaccggaccacctctttctccgtactg
gacattctggaccccaacaagttcacgagcagccgacgacagcagcagcacgcgagccac
ggaggtgagcgggagctgaacgcgtacggagcggagaaccggagagggggaactggggag
tgcgaggccagcctggaacccagcaaaggctgctacggtgcggaggaataccagagcaag
gaaggctttgtatacagaagccacgatgaggatgactatcacagatctgggaccccagat
tcagaggctccagacgggccctacagcagtgaggagagcagctcagcactgcccagtagc
ggagacagagatctgggccagcacagcatccaggaccatggcagagaaaccaagagccct
ggtggaggccccacaggccagctcgccgatgtccaggccaacgggggacaggaaacgcag
ggcaaaccaaagaggaagcgctctggctcggactccaagtcggggaagccccgtcgagcc
cggactgccttcacgtatgagcagctggtggcgctggagaacaagttcaagtcaacgcgc
tacctgtcagtttgcgagcggctcaacctggccctgtcactctccctcaccgagacccag
gtaaagatatggttccagaaccgtcgtaccaagtggaagaaacagaaccccggagcagac
acctccgcccccaccggcacaggaggaggaggaggtttgggaggaggcctgggaggcctt
agccctctcagcacgtcccctccaatcagtgggcacctggccatgcacgctggctacgcc
gggcaccatcacccccccaccggcagccttgttcagctgcctttcctcactgccagccac
gtcctgtcccctttcatgctggggacacagagctacgctgcacctgccttctacagcaca
cacctgtag
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