Pseudoliparis swirei (Mariana hadal snailfish): 130210016
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Entry
130210016 CDS
T09868
Name
(RefSeq) BEN domain-containing protein 4 isoform X1
KO
K27845
BEN domain-containing protein 4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pswi03400
]
130210016
DNA repair and recombination proteins [BR:
pswi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
130210016
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Gene cluster
GFIT
Motif
Pfam:
BEN
bZIP_1
NYD-SP28_assoc
INO80F
Motif
Other DBs
NCBI-GeneID:
130210016
NCBI-ProteinID:
XP_056295977
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Position
19:complement(21323844..21332563)
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AA seq
535 aa
AA seq
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MEGAMQPADGGPCAPKMCRQHRGPYSTLKPFQSKRSAGKSRADRSAVVELPLFGDGHHFT
FHPEQPHRFQPHHHHHQQQQQRHQTSVAVSSSSQQHHHPTPQQQQDPFPCENRPSSRVPT
STSAAAAAPSPGTQQRRGAEPRLSPDCTYSISSENRLILDAFAQQCSRVLSLLNNGRLLE
PSSSSSSSTFTSNIKLEGGPGEVQGLRCSSLLKSKPEESSSTTDPEGEAQQSHMNQQQTS
AVLRIFTDSLQNYLLSEPPQHPAAGLDDEKCPAAGPGSGASPPRHNLGGWGSPTPSESYG
HPSSTLPEEEEEEEEESCCPRCLELEQEVLSLQQENEELRNKLENVPVPSQNTLDYFKTV
LEFHNQLIQPMPEEQLTEGSKQLLENYPLFISNKQWDEAVNSSKKDGRRLLRYLIRFVFT
TDELKFSCGLGKRKRSVHSGDPGLERRPLNPVKVSCLREFIRMHCASNPDWWMPSEEQIN
KVFSDAVGHARQGRAVGTFLGSSGSSTSSLYMDGFDGHLSHDELYLKGCQNGLSD
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggagggagcgatgcagcccgcggacggagggccctgcgccccgaagatgtgccgacaa
caccggggtccgtacagcaccctgaaacccttccagagcaagcgctcggcgggcaagtcg
cgcgctgacaggtccgctgtggtcgagctgcctctgtttggcgacggacatcacttcact
ttccatcccgagcagcctcatcgtttccagccccatcaccaccatcaccagcagcagcag
cagcgccaccaaaccagcgtcgctgtcagcagcagcagtcagcagcatcaccacccgact
ccccagcagcagcaggatcctttcccctgtgagaacaggcccagcagcagggtcccgaca
tccacctcggcggcggcggcggctccatctcctggtacccagcagcggcgcggagcggag
cccagactttccccagactgcacctacagcatcagctcagagaatcgtctcatcctggat
gccttcgcccagcagtgcagtcgagtcctcagcctcctcaacaacggtcgtctcctggag
ccatcctcctcctcctcctcctccaccttcacgtccaacatcaagctggaaggcgggccg
ggggaggtacagggtcttcgctgctcctcgctgcttaagtccaaacctgaagagagctcc
tccaccacggacccagaaggggaggcccagcaaagccatatgaaccaacaacagacctct
gccgtcctccgcatcttcacggactccctccagaactatctgctctcagagcctccgcag
catccggctgccggtctggacgatgagaagtgtccggcggcggggcccggctcaggggcg
tctcctccgagacacaacctgggcggctggggctcgcccactccgtcagagtcgtacggc
cacccgtcgtccacgctgcccgaggaggaagaggaggaggaggaggagagctgctgcccg
cgctgcttggagttggagcaggaggtgctgtctctgcagcaggagaacgaagagctccgc
aacaagctggagaatgtcccagttccctctcaaaacacccttgactacttcaaaactgtt
ctggagtttcacaaccagctgatccaaccgatgccggaggagcagctcaccgagggcagc
aaacagctgctggagaactatcctctcttcatctcgaacaagcagtgggacgaagccgtc
aactcctccaagaaagacggcaggcggctgctgcgctacctgattcgcttcgtcttcacc
acagacgagctcaagttctcctgcggtttgggcaaaaggaagcgctcggtccactcagga
gatccaggcctggagaggcggccgctcaaccccgtcaaagtcagctgcctcagagagttc
atccggatgcactgtgcctcaaacccagactggtggatgccgtcagaggagcagatcaac
aaggtgttcagcgacgccgtcggtcacgcccgtcagggccgagcggtcggtacgttcctg
ggcagcagcggcagcagcaccagcagcctctacatggacggcttcgatggacatctgtcc
cacgacgagctgtatctgaaaggctgccagaacggcctgtcggactga
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