Pseudoliparis swirei (Mariana hadal snailfish): 130210019
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Entry
130210019 CDS
T09868
Symbol
hdac3
Name
(RefSeq) histone deacetylase 3
KO
K11404
histone deacetylase 3 [EC:
3.5.1.98
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130210019 (hdac3)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
130210019 (hdac3)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
130210019 (hdac3)
HDAC complexes
SMART complex
130210019 (hdac3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
130210019
NCBI-ProteinID:
XP_056295981
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All DBs
Position
19:complement(5480617..5487855)
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AA seq
428 aa
AA seq
DB search
MSNRTSYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLFKKMMVFKPYKASQHDMCR
FHSEDYIDFLQKVSPNNMQGFTKSLNTFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNH
KICDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQEA
FYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVI
KQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGDCVEFVKSFTIPLLVLGGGGYTV
RNVARCWTFETSLLLDETISDELPYSEYFEYFAPDFTLHPDVSTRIENQNSRPYLEQIRQ
SVFENLKMLNHAPSVQIHDVPSDMLSYERTDEPDPDERGGDEAYTRPEAANEFYDGDHDN
DKESDVEI
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacagaacctcttatttctacgacccggacgtgggcaactttcattacggtgcc
ggtcacccgatgaagccccaccgcttgtctctgactcacagtctggtgttgcactacgga
ctcttcaagaaaatgatggtgttcaagccgtacaaagcgtctcagcacgacatgtgtcgg
ttccactccgaggactacatcgacttcctgcagaaggtcagccccaacaacatgcagggc
ttcaccaagagcctcaacacgttcaatgtcggggacgactgccctgtgtttccaggcctc
tttgagttttgctccaggtacacaggcgcctccttacagggcgccacgcagctcaaccac
aagatatgcgacattgccatcaactgggccggaggtttgcatcacgccaagaagtttgag
gcatctgggttttgttacgtcaacgacatcgtcatcagtattctggagctcctcaaatac
caccccagagttctgtacatcgacatcgacattcaccacggcgacggcgtccaggaagcc
ttttacctgaccgaccgcgtcatgaccgtgtccttccacaaatacgggaactactttttc
cccggaacgggtgacatgtacgaggtgggcgcagagagcggtcggtactactgcctcaac
gttcccctcagagacggcatcgatgaccagagctaccggcagctgttccagccggtcatc
aaacaggtggtggatttctaccagccgacctgcattgttctccagtgtggagcagattct
ctgggctgcgaccggctgggctgcttcaacctcagcatacgaggacacggcgactgtgtg
gagttcgtgaagagttttacgattcctctgctggtcctgggaggaggaggctacaccgtg
aggaacgtggctcgctgctggacctttgagacgtctctgctactggatgaaaccatcagc
gatgagctgccttacagcgagtactttgagtactttgctccggacttcacgctgcatccc
gatgtgagcacccggatagagaaccagaactccagaccgtacctggagcagatccgccag
tcggtgttcgagaacctgaagatgctgaaccacgcgcccagcgtccagatccacgacgtg
ccgtccgacatgctgagctacgagcgcaccgacgagcccgaccccgacgagaggggcggc
gacgaggcctacacccggccggaggcggcgaacgagttctacgacggcgaccacgacaac
gacaaagagagcgacgtggaaatttga
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