Pseudoliparis swirei (Mariana hadal snailfish): 130210024
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Entry
130210024 CDS
T09868
Name
(RefSeq) plastin-3-like isoform X1
KO
K17336
plastin-3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pswi03400
]
130210024
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130210024
04147 Exosome [BR:
pswi04147
]
130210024
DNA repair and recombination proteins [BR:
pswi03400
]
Eukaryotic type
Check point factors
Other check point factors
130210024
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
130210024
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130210024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CH
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
CAMSAP_CH
Motif
Other DBs
NCBI-GeneID:
130210024
NCBI-ProteinID:
XP_056295985
LinkDB
All DBs
Position
19:6602694..6612309
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AA seq
616 aa
AA seq
DB search
MSAKVSAEEMEEINVAFRKVDVDGNGYISASELGDLFSEVGSPMPGYQVRLLLAKLDRDN
DSHIDIEEFKAIFTEMKDDRASLSFRKALNKKEGILAMGGTSVISSVGTQHSISEQERFA
FANYINSSLEEDPDCHHILPINPTTEALFGAVRDGILLCKLINHSVPDTIDERTINLKKL
TAFTIQENLNLALNSASAIGCQVVNIGAQDLKEGKPHLALGLLWQIIKIGLFAEMELSRN
EAIAALLGDGESLEELMNLSPEDLLLRWVNYHLKKVGMSISNFSGDIKDSRAYFHLLEQI
SPDGKEEGVPRFEVDMTGIYDQDLAKRAEFMLKQAERLGCRQFVTAADIESGNAKLNMAF
VATLFNKHPALTKPDFELDWTMKSETREERTFRNWMNSLGVSPHVHHIFCDLQDAMVILQ
LFEKVKVSVDWECRVNLPPFKGVGAGHLKKRENCTYAVELGKEKAGFSLVGIGGQDLYDG
NPTLTLAVVWQIMRRYTFNLLEDLGDGEVAGDDLIVSWVNKTLAEAGKTSSIKSFKDKSI
ETSMPVLDLIDSIQPQSVKFDLVQKGSLSDEDKLNNAKFAISMARKIGAKVYALPEDLVE
VNPKMVMTIFACLMAR
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgaaggtcagcgccgaggagatggaggagatcaatgtggccttccggaaagtg
gatgtggacggtaacgggtacatcagcgcctcggaactcggtgacctcttcagcgaggtg
ggcagtcccatgcccgggtaccaagtcaggctcctcctcgcaaagctggacagagacaac
gacagccacatcgacatcgaagagttcaaggctattttcacggaaatgaaggacgaccgc
gcgtctctgagtttcaggaaagcgctgaacaagaaagaaggcatcttagccatgggggga
accagcgtgatctcgagtgtaggaacccagcattccatctctgagcaggagcgctttgcc
tttgccaactacatcaactcttctctggaggaagatcccgactgtcaccacatcctgccc
atcaaccccacgaccgaagctctgtttggagcagtgagagacggcatcctgctttgtaaa
ctcatcaaccactctgtccccgacaccatcgatgagagaaccatcaatctaaagaaactc
acagcgttcaccatacaggagaatctgaacttggctctgaactccgcctcggccatcggc
tgccaagtcgtgaacatcggcgctcaggatctgaaggaggggaagcctcacctggccctc
gggctcctctggcagatcatcaagatcggactgttcgccgagatggagctgagccgcaat
gaagctatagcagcgctgctgggggatggggagagtctggaggagctgatgaatctcagt
ccagaggatctgctgctgcgctgggtcaattaccatttgaagaaagtcggcatgtccata
tcaaacttttctggagacattaaggactccagggcgtacttccacctgctggagcagatc
tctccagacggcaaagaagagggcgtcccgcgcttcgaggtggacatgaccggtatctat
gatcaagatctcgccaagagagcggagttcatgctcaagcaggccgagcgcctcggctgc
cgccagtttgtgaccgccgcggacatcgagagcggaaacgcgaagctcaacatggccttc
gtggcgacgctcttcaacaaacacccggcgctcaccaaaccggacttcgagttggactgg
actatgaagagcgagaccagagaggagcggacgttcaggaactggatgaactctctggga
gtcagtccgcacgttcaccacatcttctgcgatctgcaggacgccatggtgatcctccag
ctctttgagaaggtcaaggtgtcggtggactgggagtgcagagtcaacctccctccattc
aagggagtcggagcagggcatttaaaaaagagggaaaactgtacctacgctgtggagctg
gggaaggaaaaggctggtttctccctggtggggatcggcggacaggatctctacgatggc
aatccaacactaactctggccgtggtgtggcagataatgaggaggtacacgttcaatctt
ctcgaagacctcggagacggagaagtcgcaggagacgatttgatagtgtcctgggtcaac
aagactttggctgaggccggcaagacttcctccatcaaaagctttaaggacaaatcgatc
gagaccagcatgccagttctggacctgatcgattccattcagcctcagagtgtgaaattt
gatctggttcagaaaggaagtctgtccgacgaagacaaactaaacaatgccaaatttgcc
atttccatggcgaggaagatcggcgccaaagtctacgccctgccggaggacctggtggag
gtcaaccccaaaatggtgatgaccatctttgcctgcctgatggcaagataa
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