Pseudoliparis swirei (Mariana hadal snailfish): 130210083
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Entry
130210083 CDS
T09868
Symbol
lsm11
Name
(RefSeq) U7 snRNA-associated Sm-like protein LSm11
KO
K25592
U7 snRNA-associated Sm-like protein LSm11
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130210083 (lsm11)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
130210083 (lsm11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
130210083
NCBI-ProteinID:
XP_056296040
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Position
19:1947806..1951940
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AA seq
390 aa
AA seq
DB search
MEERDRKSLKPDPKDAVASGSSVPGPRAAATGDDDAGRTDVCSDRFDPLLALYAPAVLLP
FPNIKGFNNVAAYESFVKGGRGRAKPENVEKRRLKATKGVADPERIARLKKLVVNNPVSE
KKLEEHAARRRRRQEVQKNVLTRMPLCKGSPLGELYRCVEERIRVKVHIRTFKGLRGVCS
GFVVAFDKFWNMAMVDVDETYREPLLGEAFHHEKALTISRLFEKLKLQENPVGDEPAENP
DRTPKNRSAHGGAESRRSGAAGVKPEARGKKEPRTYGRVLERHINQLFIRGENVLLVNPQ
PLGPQTPGPQTPGPQTPGPQTPGPQTPGPQTPGPQTPADARPADARPADARPAAAWIERI
RSLEGSLTTSQSTTYREDRGVPLGKSAPWW
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcgagacagaaagagcttgaagcccgaccctaaagacgcggtcgcttccggc
tcttcggtcccggggccgcgagcagcggcgaccggagacgatgacgcgggaagaacggac
gtctgctcggaccgcttcgacccgctcctggccctgtacgcgccggccgtgctgctgcct
ttccccaacatcaagggcttcaacaacgtggcggcgtacgagagcttcgtgaagggcggc
cgcggccgagccaagccggagaacgtggagaagaggcggctgaaggcgacgaaaggcgtg
gcggaccctgaacgcatcgcgaggctgaagaagctggtggtgaacaacccggtgtcggag
aagaagctggaggagcacgcggcgcgcaggaggaggaggcaggaggtccagaagaacgtc
ctgaccaggatgcccctgtgtaaaggcagtccgctgggcgagctgtacaggtgtgtggag
gagaggatccgggtcaaagttcacatcaggaccttcaagggcctgaggggggtgtgctcc
ggcttcgtcgtggccttcgacaagttctggaacatggcgatggttgacgtggacgagacg
taccgggagccgctgctcggagaggccttccaccacgagaaggccctcaccatctcacgg
ctcttcgagaagctgaagctgcaggagaacccggtgggagacgagcccgcggagaaccca
gacagaaccccgaaaaacaggtccgcccacgggggggcggagtcccgacgctccggcgcc
gccggagtcaaaccggaggcccgcgggaagaaagagccccggacgtacggccgggtcctc
gaacgccacatcaaccagctgttcatccggggggagaacgtcctgctggtgaacccgcag
ccgctcggcccgcagacgcccggcccgcagacgcccggcccgcagacgcccggcccgcag
acgcccggtccgcagacgcccggcccgcagacgcccggcccgcagacgcccgcagacgct
cggcccgcagacgcccggcccgcagacgcccggcccgcagccgcttggatcgaaaggatc
cggtcgctggaaggatcgctcaccacgagccagagcacgacgtaccgggaggacagaggc
gtcccactggggaagagcgccccctggtggtga
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