Pseudoliparis swirei (Mariana hadal snailfish): 130210154
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Entry
130210154 CDS
T09868
Symbol
gabra6a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6a
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04080
Neuroactive ligand-receptor interaction
pswi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130210154 (gabra6a)
04082 Neuroactive ligand signaling
130210154 (gabra6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130210154 (gabra6a)
Ion channels [BR:
pswi04040
]
Ligand-gated channels
GABA-A
130210154 (gabra6a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
DUF1007
DUF2656
Motif
Other DBs
NCBI-GeneID:
130210154
NCBI-ProteinID:
XP_056296119
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Position
19:12298227..12304690
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AA seq
445 aa
AA seq
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MAILIFTRVTFVCCIILGSVRGSEKIHSDNITLILDRFLDGYDNRLRPGSGGGITEVKTD
IFVTSFGPVSDVEMEYTMDMFFRQMWVDERLKFEGPSEILRLNNRMVDKIWTPDYFFRNS
KKSISHNMTTPNKLFRIMQNGTVLYTMRLTIISECPMRLMDFPMDGHACPLRFGSYAYTS
SEILFTWRKGLVASVDCPAESMSLLQYDLVGQTLSSEIFKSNTGYYSVMVVHFFLKRKLG
YYLIQTYIPLIMVMVLSQVSFWINKESVPARTVAGITTVLTMTTLSISARESLPKVAYAT
AMDWFIAVCFAFVASALVEFAAVNYFATLQANRLKKQKARQDKLEVLATGNDDDNAVSDC
SPQEGLKRRNHSTCHTEPEDAQTVPIFLQQGSAFPQIPQLAGTSPIDKYARILFPLAFAL
FNLVYWYIDLAKDTMESAREAVLRN
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggctattctgatatttacgcgtgttacttttgtctgctgtataattcttggtagtgta
cgtggaagtgagaaaattcactcggacaacataactctcattttggatcgatttttggat
ggttatgacaacagattgcgacctggatccggaggtggtattacagaggtgaaaacagac
atctttgtcaccagctttggaccagtatcagatgttgagatggagtacaccatggacatg
ttcttccgtcagatgtgggttgacgagcggctaaagtttgaaggcccctccgaaatcctg
cggctgaacaaccgcatggtggacaagatctggacgccagattattttttccgaaactcc
aagaagtccatctctcataacatgaccacaccaaacaaactcttccgcatcatgcagaac
gggactgtcctctacaccatgaggttgacaatcatttcagaatgtccaatgagactcatg
gacttcccaatggacggccacgcctgtcctctcaggtttggaagttacgcctacacaagc
agtgaaatccttttcacttggaggaaaggactagtagcatccgtcgattgtcccgctgag
tccatgagtcttctgcagtatgacctggtgggacagactttgtctagtgagatattcaaa
tcaaacacaggttactactctgtgatggtggtccatttcttcctcaagaggaagctgggc
tactaccttatacagacttacatccctcttattatggttatggtgctgtcacaagtctct
ttttggatcaacaaagagtctgttcctgcacgcacagttgccggcatcaccacagtgctg
accatgaccaccttgagcatcagtgcccgtgagtcactgcccaaagtagcctatgccacc
gccatggactggttcattgccgtgtgttttgcctttgtggcgtcggctcttgtcgagttt
gccgcagtcaactattttgccactctccaggccaaccgcctgaagaagcagaaagctcga
caagacaagcttgaggtgttggctaccggcaatgatgatgacaacgctgtgtcggactgc
agccctcaggaaggcttgaagaggagaaaccactcaacgtgtcacactgagccagaagat
gctcagacggtgccgatattcctccagcagggctcagcttttcctcaaatcccacagctg
gctggcactagcccaatcgacaagtatgcccgtatcctctttcctctggccttcgccctc
ttcaacctagtctactggtacatcgacttggccaaggacaccatggagagtgcaagggaa
gcggttcttagaaactaa
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