Pseudoliparis swirei (Mariana hadal snailfish): 130210189
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Entry
130210189 CDS
T09868
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1
KO
K04650
nuclear receptor co-repressor 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
130210189 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pswi01009
]
130210189 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130210189 (ncor1)
Protein phosphatases and associated proteins [BR:
pswi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130210189 (ncor1)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
130210189 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
130210189
NCBI-ProteinID:
XP_056296189
LinkDB
All DBs
Position
3:12248785..12302844
Genome browser
AA seq
2459 aa
AA seq
DB search
MSSSSGYPPSQGSFSSEQNRYPPHSVQYTFSGSRHQQDFSVPDYRAHMQDPQGRRRPSLL
SEFHPGTERPPERRHGYEQQFHSISALSEHEALEAKRPRMETVVEGHIIRTPTTAGGIVL
PLTHSVQDGLRAGADVKKDSVKGDSMSSGGTALHMGDDQDASPSKLSKEELIQSMDRVDR
EIAKVEQQIFKLKKKQQQLEVEAAKPVEPEKPVTPPPVERKHRSIVQIIYDENRKKAEEA
HKVLEGFGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHARKQREQKICQR
YDQLMDAWEKKVERMENNPRRKAKDGRTREYYERQFPEIRKQREQQERFQRVGQRGTGLS
ATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDTEQRRVRFINMNGLMDDPMKV
YKSRQLMNVWNEHEKEIFKEKFVQHPKNFGLIASYLERKCVADCVLYYYLTKKNHNYKTL
VRRNYGRRRGRNQQITRPSQEDKPDEKIEEEKIEKSEKKEDEEKKDEEEKDEKEDSRDIG
KDKDKCDGGEDEDGKEQNTPRGRKTANSQGRRKGRITTRSMANEAASVAAEEAPPTAPEP
ALPDPPQLPKSDPMLKSMKEPAKPQTPVASMDANKAGAGETGETSRWTEEEMEVAKKGLV
EHGRNWTAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQDTRRARADRSQGEGLAV
ASPDDDDDDDNADDSDGAENSSDTESAPSPSHSGDSKRADSAAGDAHCSDQDKGQASNGK
ALEPLYRGLCVKEEKSPESETGSPEEKAKMASYADSVHPKTEPQDVDMKTGEVQIKMEPD
IRERGEKGDHGERHRELHSDNDSSATCSADEDVEAEPERPRMFSMDKPTLLNPPGSVLVS
SPKQTQLNIQQMQQRAANIPPMVPGPFGPGGVPISGFAMLQHQIKAVHDSAHQEEKQRQD
QGDLERRPPFNTRSPIVIDRDGKPLPYMPYDMKLALDQEVHSGRPGSPYRLSARELSKAL
PQPDPNASRYSVPPVLHPAANQLVQSMPDGVRVTFSRPSRPPNIPSPPPLIPTTKPTDKP
SFIQGGSISQGTPGTYLPSHAVYGPEGSKSTVGSISLGLPRQQDPNKPGGAVPSIQDGRG
NQAKMAEGLTMRGSITQGTPALPQSSIAADLLKGTITKLATEDLSNPDKSRGEQLSKGHV
IYEGKSGHILSYDAIKNPRENTRSPRTAHELKRTYDMMEGPMGRGHPGREGAPFEGLISR
ALPREGLHGDPKERQLITGSIMQGTPRTATETYDDAMKYGKQIKRESPPIRSFEGGIGKG
KPYEGVNTIKEMGRSIHEIPRQDQPGQDICKTPDLSDRRVMEGSMSQIHPLNQSTIKHNV
KSLITSPSKLPHSMPQLEAMERAKYEESKAVRHTVVNSTGSVLRSTHQEASKSQLSPSMY
EDPNARRTPVNYSTNSGSRGSPMLERGPEGVMSSVKSAGHERKSAITPTQRDNVPAKSPV
LGGDPHPGASHSPFDPHHRPVGPGEVYRPHLPPHLDPAMAMTLHRGLDPAFMFPRQPSPT
GYHNTYQLYTMENTRQTILNDYITSQQMQVIRPDMARGLSPREQPVALPYAAGARGIIDL
AQMPPTILLPHPGGTGTPTMERMAYLPGAQPPFPSRAFNQTSISPGHQAHLAAAAAASAE
REREQRDHEQQEKEREKEREREHREREHREREREREMRERERERANEYIRGSGPEQPGSR
GYLHSASPSLRTQDVVVQQRPSIFQGKSVITALMPHSAAVSAAAQSNSRYSTAADALAAL
VDAAASAPQMDVAKVKESKNERDEEMSSSAVVRRVASLSEQQQQQQQQQQQQQQQQQQQQ
QLQQQLQQQQQLQQQQQQQQQQQQQEAERRSMQSPYGAMSLPGGKPHPGYSEGPGVGVKD
KGPQTSKSRIEEELRTHGKTTITAANFIDVIITRQIASDKDSRERGSQSSDSSSSLASSR
YDNAAGGTIEVISPASSPVQPQQDKPEEGQQQAATGMRGYDMSRYRPSGEAPQPSSQQPP
SSQVESYSQVTKTHRLMTLADHISHIITQDFARNQDPPPVSSSASATFQSAGPPVSSSGR
AKMPSRYSPENQVQASHHQRPSSRVSPENAPDKSRSRPGKSPERGGRQMENYEPISPPQS
YQAMDKQEAIGPPPQRREADNSEIRNDSRSPGSVSYLPAFFTKLENTSPMVQSKKQEIFR
KLNSNSGVGDSDVGNAQPGTEIFNLPAVTTSSSINTRNHSFSDPANNLGLEDIIRKALMG
NLEERPEEHQGGLGAQCATNNTPGQGSDARQEANPSPSMGKQKHSKANSRKTKSPNLGQA
YAGGERPSSVSSVHSEGDYHRQAQAQPQWGWDDRPSSTGSMQFPYNPLTMRILSSTPPTS
IASPSIQSQQQQQQQQQQQQQQQQQQQQQPPPAGAPVAQQRVWQSLLSEQYETLSDSDD
NT seq
7380 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtagctcgggctacccccccagccaggggagcttcagcagcgagcagaaccgc
tacccaccccattctgtccagtacaccttctccggctcgcgccaccaacaggatttcagc
gtcccagactatcgggctcacatgcaagatccacagggtcggagaagaccatctctgcta
tccgaattccaccccggaaccgaaaggcctccagagaggcgccatggttacgaacagcag
ttccactccatctccgccctgtcggagcatgaggccttggaggccaaacggcctcgcatg
gagactgttgttgagggccacatcatccgcacgcctaccactgctgggggtattgtcttg
cccttaacccactcggtacaggacggtctcagagccggtgcggatgtcaaaaaggactct
gtcaaaggggactccatgtcctcagggggaactgcactacacatgggcgacgatcaggac
gcttctccttccaaactatccaaagaggagctgatccagagtatggaccgtgtggaccga
gagattgcaaaagtggagcagcagattttcaaactcaagaaaaagcagcaacaactggag
gtggaagcagcaaagccggtggagccagaaaagccagtgactcctcccccagtggagcgc
aagcatcgcagcatcgtccagatcatctacgatgagaaccggaaaaaagcggaagaggcc
cacaaagtcctggaaggtttcggccctaaggtcgagctgcccctctacaatcagccatcc
gacacaaaggtgtaccatgacaacatcaagaccaaccaagtcatgcggaagaagctgatt
ttgttttttaagaggaggaaccacgctcgtaagcaaagggaacagaagatctgccagcgc
tacgaccagctgatggacgcatgggagaagaaggtggagcggatggagaacaaccccaga
cgcaaagccaaggatggcagaacacgggagtactacgaaaggcaattccctgagatccgc
aagcagagggagcagcaggagcgcttccagagggttggacaaagaggaacgggcctttct
gcaacaattgcaagaagcgagcatgagatctctgaaatcatagatggcctttctgagcag
gagaacaacgagaaacagatgagacaactgtcagttattcctcccatgatgtacgacacg
gagcagaggcgagtgaggtttatcaacatgaacggcttgatggatgacccgatgaaggtt
tacaagagccggcagttaatgaacgtttggaacgaacacgaaaaggagatctttaaggag
aagttcgtccaacaccccaagaactttggcctgattgcctcctatctggagagaaagtgt
gtggctgattgtgtcctttactactacttaaccaagaagaaccacaactacaagacgctg
gtgaggcgaaactatggaagacggagaggaaggaaccagcaaataacacgtccctcacaa
gaagacaagccagacgaaaaaatcgaagaggaaaaaattgagaaatctgagaaaaaagag
gacgaggaaaagaaggacgaggaagagaaagatgagaaggaggattctagggatattggc
aaggacaaagacaagtgtgacggtggggaggacgaggacggaaaggagcaaaacacgccg
cgtggcaggaagactgccaatagccagggccgacgtaagggaaggatcaccacacgctcc
atggccaatgaggctgcatctgtggctgctgaggaggctcctcccactgcccctgagcct
gccttgccagatcctcctcagctccccaagtctgatccaatgctaaagtccatgaaggag
cctgcaaagccccagactccagtagcttccatggacgctaataaagctggtgctggtgaa
acgggagaaacttctcgctggaccgaggaggagatggaggtcgccaaaaaagggttagtt
gagcacgggcgaaactggaccgctattgccaaaatggtgggcaccaaaagtgaggcacag
tgcaagaatttctatttcaactacaagagacgtcacaacctggacaacctgctccagcag
cataagcaggacacacggcgggctcgtgctgataggtctcaaggtgaaggtctagccgtg
gcgtcacctgacgatgacgatgatgacgacaacgcagatgacagtgatggcgctgaaaac
agctctgatacagagagtgctccctccccctctcactctggcgactccaagagggcagac
agcgctgcaggagatgctcattgctccgaccaggacaaaggtcaggccagtaacggaaag
gctctggagcctttatacagaggactctgtgtcaaggaagagaaaagcccagaaagtgag
actggatctccggaggaaaaggccaagatggcttcctatgcagactcggtccaccccaaa
actgaacctcaggatgtggacatgaagaccggagaggttcagatcaagatggagcctgac
atcagggagagaggagaaaaaggagatcacggcgagaggcacagggaactccactcagat
aatgactccagcgccacctgcagtgctgacgaggatgtggaagcagagcctgaaagaccg
agaatgttctccatggacaagcccacattgctcaaccctccaggctctgtgctggtgtcc
tcgcccaagcaaacccaactcaacatccagcagatgcagcagcgggccgcgaacatccca
cccatggtgcccggtccgtttggccccggcggtgtgcccatcagtggctttgccatgttg
caacaccagatcaaagcagtgcacgactcggcgcaccaggaggagaagcagcggcaggat
cagggagacctggagcgcagaccgcctttcaacacccgcagccccatcgtaatagacaga
gatggtaagcccttaccttacatgccttatgacatgaagctagctctggaccaggaggtc
cactctggtcggccaggctctccctacagactctccgccagagagctgagcaaggcctta
ccccagcctgaccccaatgcctcccgctacagtgtgccaccagtcctccaccctgccgcc
aaccagctggtccagagtatgccagatggagtccgcgtgacgttcagcagacccagtcga
cctcccaacattccctctcctcctccactcattccaaccaccaagcccacggacaagccc
tccttcatccaggggggctccatctctcagggaactcctggcacatacctgccgtcccac
gcggtctatggaccagagggcagtaagagcacagtgggctcaatctctctgggtctgcct
cggcagcaggatcctaacaagcctggaggcgcagtgccatccatacaggacggcagaggc
aaccaagcaaagatggccgaggggcttacgatgagaggatcaatcactcagggcacaccg
gccctgccccagtccagcattgctgctgacctcctgaagggcacgatcacaaagttggcc
acagaggacctgagcaacccagacaagtcaaggggagagcagctatctaaaggtcatgtc
atctatgaaggcaagagtggtcacatactctcgtatgatgctatcaagaacccgagggaa
aacacccgcagccccagaaccgcccacgagctgaagcgcacttacgacatgatggaggga
cccatgggcaggggacaccctggcagggaaggagctccatttgaggggttgatcagcaga
gctttgcccagagaaggtctacatggagatccgaaagaaagacagttgatcacaggatcc
atcatgcaaggtacaccgagaaccgccacagagacctatgacgatgccatgaaatatgga
aaacagataaagcgagagagcccaccgatccgctccttcgaagggggcattggtaaggga
aagccctatgagggagtcaatactatcaaagagatgggacgctctattcacgaaatcccc
agacaagatcagcctggccaggacatctgcaagacccctgacctgtcggacaggagggtt
atggagggctccatgtctcagattcaccctctgaaccagtctactataaagcacaatgtc
aagtccctcatcaccagtccctctaagcttccccacagcatgccccagctcgaggccatg
gaacgtgccaaatacgaggaaagcaaggcggtgcgccacactgtggtcaactccaccggc
tctgtcttgcgctccactcaccaggaggctagcaaatcccaacttagcccaagcatgtat
gaggaccccaacgctcgcaggacccccgtcaactatagcaccaattctgggtccagggga
tcgcccatgttggaacgtggaccagaaggtgttatgagttctgtgaaatctgccggtcat
gaaaggaagagcgccattaccccgacacagagggacaatgtcccagccaagtccccagtg
ttgggtggtgaccctcaccctggagcctctcacagcccctttgacccccaccaccggccc
gtcggtcctggggaagtgtacagaccccacctgcctccacacctcgatcctgccatggcc
atgactcttcacagagggctggatcccgcgttcatgttccccaggcagccgtctccaacc
ggctaccacaacacctaccagctgtacaccatggagaacacgcggcagacgatcctcaat
gattatatcacttcccagcagatgcaagtcatccgacctgacatggcacgagggttgtca
ccacgggaacagcccgttgctctcccttacgcagccggtgctcgagggattattgatcta
gcccagatgcctccaactatcctgttgcctcaccctgggggaacaggtactcccactatg
gaacgcatggcctacctccctggagctcagccccctttcccttctagggctttcaaccaa
acctccatatcgccaggccaccaggcccaccttgctgctgcagctgctgccagtgcagag
agggagcgggagcagcgtgaccatgagcaacaggagaaggagagagaaaaagaaagagaa
agggagcatcgggaaagggagcaccgagagagggaacgagagcgggaaatgcgagaacga
gagcgggagagagccaatgaatacatccgtggaagtggaccagagcagcctggaagtcga
ggttatctgcactccgcttcaccctcgctcaggacgcaggatgtcgtggttcagcagcgg
cctagcatcttccagggcaagagtgtcatcactgctctaatgccccattcagcagcagtg
tctgcagcagcacagagtaactcacgctacagcactgcagctgatgctctggctgctctg
gtggacgctgctgcctctgccccacagatggatgtggccaaggtgaaggagagcaaaaat
gaacgggatgaagaaatgtcttcatcggctgttgtccggcgagtggccagcctctctgaa
caacagcagcagcaacaacaacagcaacagcagcagcaacaacaacagcaacagcagcag
caactgcaacaacaactgcagcaacagcagcaactacagcagcaacaacaacaacaacaa
caacaacagcagcaggaggcagagaggcggtccatgcagtccccatatggcgctatgtct
ctgccagggggaaagccccatccaggttactctgagggccctggagtcggggttaaggac
aagggtcctcaaacctcaaagtcccgcattgaggaggagcttcggactcatggaaaaaca
actatcacagccgctaacttcatcgatgtcatcatcacacggcagatagcctcggacaaa
gactcacgagaacgaggctcacagagctctgactcttctagcagcttggcatccagtcgc
tacgacaacgccgctggaggaaccattgaggtgataagccctgctagttccccagtccag
ccccaacaggacaaaccagaggaagggcaacaacaggcagcaactggcatgcggggctac
gacatgagtcgttaccggccatcaggggaagcaccgcagcccagttcccagcagcccccg
tcctcccaggttgagagctactcccaggttaccaagactcaccggctcatgaccttggca
gaccacatttcgcatattataacccaggacttcgcccggaatcaggaccctccccctgtc
tcctcttcagcttcggccacattccagagcgcgggcccacccgtttcctcttcagggcga
gccaagatgcccagccgctacagtcctgagaatcaggtccaggcctcacaccaccagaga
ccctccagcagagtctccccagagaatgcccctgacaagtctagatccaggccgggtaaa
tctccagagagaggcggcaggcagatggagaactatgaacccatctctcctccacagagc
taccaagccatggacaagcaggaggcgatcgggcctccgcctcagaggcgagaggctgac
aactctgagatcaggaatgactcgcggtccccagggagtgtcagctatctgcctgccttc
ttcaccaagctggagaacacctcgcccatggtgcaatcaaagaagcaggaaatctttcgt
aaattgaactccaactctggtgtcggtgattctgatgttggaaacgcacaaccaggcaca
gagattttcaacttgcctgctgttaccacctcaagcagcatcaacaccaggaatcactca
tttagcgacccggccaacaacttaggcctggaggacatcatccgcaaagccttgatgggc
aacctggaggagagaccggaggagcaccagggaggactcggggctcagtgtgccacgaac
aacacacccggccaaggcagtgacgcccgccaggaggccaacccgtcacccagtatgggg
aagcagaagcacagcaaagccaacagccggaaaaccaagtcccctaaccttggtcaggcc
tacgctggaggggagcgtccgtcttctgtgtcctccgtccactcggagggagattatcac
agacaagcccaagctcaaccacaatggggctgggacgaccgaccttcgtccacgggatcc
atgcagttcccttacaacccgctgaccatgcgcatactgagcagcacgccacccacctcc
atagcttccccctccatacaaagccagcagcaacaacaacaacaacaacaacaacagcag
caacagcaacagcagcagcagcagcagccgcctcctgctggagccccggtggcccagcag
cgtgtgtggcagtctctgctgtcagagcaatacgagaccctgtctgacagcgacgactga
DBGET
integrated database retrieval system
