Pseudoliparis swirei (Mariana hadal snailfish): 130210196
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Entry
130210196 CDS
T09868
Symbol
g3bp1
Name
(RefSeq) ras GTPase-activating protein-binding protein 1
KO
K17265
Ras GTPase-activating protein-binding protein 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
130210196 (g3bp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130210196 (g3bp1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pswi04147
]
130210196 (g3bp1)
Enzymes [BR:
pswi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
130210196 (g3bp1)
5.6.2.5 RNA 5'-3' helicase
130210196 (g3bp1)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
130210196 (g3bp1)
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130210196 (g3bp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NTF2
RRM_1
RRM_7
NXF_NTF2
Motif
Other DBs
NCBI-GeneID:
130210196
NCBI-ProteinID:
XP_056296192
LinkDB
All DBs
Position
19:27254909..27265655
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AA seq
507 aa
AA seq
DB search
MVMEKPSAQLVGREFVRQYYTLLNQAPDYLHRFYGKNSSYVHGGLDNNGKPVEAVYGQSE
IHKRVMALSFRDCHTKIRHVDAHATLTEGVVVQVMGELSNNMQPMRKFMQTFVLAPEGTV
ANKFYVHNDVFRYQDEVFGDSDSEPPEESEDEVEELEERVPSPDAAPVESASFYAPTACS
EPTAPGDDEEDDEDEEEEAACPEPEAEKAAAVVELKPDATSPPETDTNASDDQKEKSAAA
TPAAEPVAAEPAAPAPPTAPEENRPFSWASVTSKNLPPSGAIPISGIPPHVVKVATAAPP
RAEVKSESQTAAQRPQRDQRPREQRPGGPPPVHRGPRPVREGEPGEAEGRRVVRYPDAQQ
LFVGNVPHDVDKTELKEFFEQYGTVLELRINSGGKLPNFGFVVFDDSEPVQKILGSRPIK
FRGDVRLNVEEKKTRSAREGDRRDIRPRGPGGPGGPRERIGGGGGGRGGGGGPRDPPTRG
GMAQKPSFGSGRGAGPSESRYPAQQRQ
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggagaagccaagtgcccagctggtcgggcgagagtttgtccgacagtattac
acgctgctgaaccaggcgcccgactacctgcacaggttctacggaaagaactcgtcctac
gtgcacggcggcctggacaacaacggcaaaccggtggaggccgtctacggacaatcggag
atccacaagcgggtgatggctctgagtttccgcgactgtcacaccaagatccgccacgtg
gacgcccacgccaccctgacggagggcgtggtggtgcaggtgatgggcgagctgtccaac
aacatgcagcccatgaggaagtttatgcagaccttcgtgctggcgcccgagggaaccgtc
gcaaacaagttctacgtccacaacgacgtgttccgctaccaggacgaggtgttcggggac
tccgattcggagcctccagaagagtccgaggacgaggtggaggagctggaggagagggtc
ccctcccccgacgccgccccggtggagtccgcctccttctacgcccccacggcctgctcg
gagccgacggctcccggtgacgacgaggaggacgacgaggatgaagaggaggaggccgcc
tgtcccgagccggaagcggagaaggccgctgcggtcgtggagctgaagccggacgcgacg
tcgccgccggagacggacacgaacgcgtccgacgaccagaaggagaagagcgccgccgcc
acgcccgccgcggagcccgtcgccgcggaacccgccgcccccgccccccccaccgctcca
gaagaaaacaggccgttctcctgggcgtccgtcaccagtaagaacctcccgcccagcggc
gccatccccatctcggggatccccccccacgtcgtcaaagtcgccaccgcagcgccgccc
agagctgaggtgaagtcagagtcccagacagcagcacagagaccacagagggaccagagg
ccgagggaacagaggcctggggggccaccgccggtgcaccgaggaccccgaccagtccgt
gagggcgagccgggcgaggccgagggccgccgggtcgtgcgttaccccgacgcccagcag
ctgttcgtggggaacgtcccgcacgatgtggacaagacggaactcaaggagttctttgag
cagtacggtacggtcctggagctccggatcaacagcggagggaagctccctaactttggc
ttcgtggtgtttgacgactccgagccggtccagaagatcctcggcagccggcccatcaag
ttccgaggagacgtccggctgaacgtggaggagaagaagacccggtcggcccgagagggc
gacaggcgggacattcggccccgcggccccgggggccccggaggaccccgagagcggata
ggaggaggaggaggaggacggggcggaggaggcggaccccgagacccccccacccgcgga
ggcatggcgcagaagcccagcttcgggtccgggcgcggcgccgggccgagcgagagccgc
taccccgcccagcagcgccagtga
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