Pseudoliparis swirei (Mariana hadal snailfish): 130210204
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Entry
130210204 CDS
T09868
Symbol
nr3c1
Name
(RefSeq) glucocorticoid receptor isoform X1
KO
K05771
glucocorticoid receptor
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130210204 (nr3c1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130210204 (nr3c1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pswi03310
]
130210204 (nr3c1)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
130210204 (nr3c1)
Nuclear receptors [BR:
pswi03310
]
3. Estrogen like
3C. 3-Ketosteroid receptor
130210204 (nr3c1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
GCR
zf-C4
Motif
Other DBs
NCBI-GeneID:
130210204
NCBI-ProteinID:
XP_056296204
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Position
19:12127470..12149311
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AA seq
775 aa
AA seq
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MDNGGVKKITYRRDDHLSKLVYTESPEEGGLLKVAPHSALSIPSVVLPSSPLMQPGQVTN
GLSNSPLPEELTSVTATASPLWEDREFRFLSKDKKLQQQQLLQTQTTFGRQTFRENLPQL
EASIADISQSCMDSLIGGSDPNFFHMKTEDSSMDKGEQDPIDLDNAFDHIGKDVDVNQKF
FSDNTLDLLQDFELTGSPSDFYVGDDAFLSTLTDDSLLGDVGSEIDVKPVVVESINSTGT
VSVALNGSIMTSPEQSSASICTASLIPTITLSALVKKEKYSGFIQLCTQGVIKQENTSAG
QSYCQMSSTSATDVPSSSPMSICGVSTSGGPSYHFGVNTSSNEAQQKDQKPVSSLFLPVT
TISRAWNRNQGVGNNSAMLRASEAFSSSPSYPTCFASANSRQEVITATSSTQGKNGTRKI
CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRFRK
CLMAGMNLEARKTKKLKRSNPNNPPELTPPPPIEARSLLPKCMPQLIPTMLSLLKAIEPN
TIYAGYDSTLPDTSTRLMTTLNRLGGRQVISAVKWAKALPGFRNLHLDDQMTLLQCSWLF
LMSFGLGWRSYQQCNGNMLCFAPDLVINEDRMKLPYMADQCEQMLKISSEFVRLQVSHDE
YLCMKVLLLLSTVPKDGLKSQAVFDDIRMSYIKELGKAIVKREENSSQNWQRFYQLTKLL
DSMHEMVGGLLSFCFYTFVNKSLSVEFPEMLAEIISNQLPKFKAGSVKPLLFHQR
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggacaatggtggtgtgaagaagataacgtatagaagagatgatcatttgagcaagtta
gtctacactgaaagccctgaggagggaggtctgttgaaagtggctcctcacagtgcgctg
tccatcccttctgtcgtccttccatccagcccgttgatgcagccaggacaggtgaccaac
ggcctcagcaacagcccccttccagaggagctcacatccgtcactgccaccgccagcccc
ttgtgggaagacagagagttcaggtttctgagcaaagacaagaagcttcagcagcagcag
ttgctccagacgcagactacgtttggtcgtcaaactttcagggaaaatttgcctcagttg
gaggcaagtatagcagatatttcacagtcctgcatggattcacttattgggggatcagat
cccaatttcttccacatgaaaacagaggattcctccatggataaaggagagcaggatccc
attgaccttgataacgcctttgatcacattgggaaagatgtggatgtgaaccagaaattt
ttcagtgacaacactttggatctcctccaagacttcgagctcaccgggtccccctcagat
ttttatgttggggatgatgcgtttctctccactctgacagatgattctctgcttggggac
gttggctcagagatcgacgttaagcctgttgtggttgagagcatcaacagcaccgggaca
gtctctgtagctctcaatggcagcatcatgacaagtcctgaacagtccagtgctagcata
tgcactgcctccttaattcctacaatcactttgtctgcattggtaaagaaagaaaaatat
tctggcttcattcagctctgcacccaaggtgtgatcaaacaggagaacacatctgcaggc
cagagctattgccaaatgagcagcacatctgctacagatgtgcccagctccagccccatg
tccatctgtggggtcagcacttccggaggaccgagctaccactttggggtcaacaccagc
agcaatgaagctcagcagaaggatcagaagccagtgtcaagcctgtttctcccagtgaca
acaatcagcagggcctggaacagaaaccaaggtgtcgggaacaactctgcaatgctccgg
gccagtgaggcgttctcaagctctccctcttaccccacctgctttgctagtgctaactcc
agacaggaagtgatcacagccacatcctcaacacagggaaagaacgggactcgtaaaatc
tgcctggtgtgctctgacgaggcttcaggctgccactacggcgttctcacctgtggcagc
tgcaaggtcttcttcaagagagcagtggaagggcagcataattacctgtgtgctgggagg
aacgactgcataatagacaagatcaggaggaagaactgcccagcctgccgcttccgcaag
tgtctaatggcaggcatgaacctggaagcgcgcaaaaccaagaagttgaagcgttcaaac
ccgaacaacccgcccgagctgactcctcctccaccaattgaggctcgctctcttttaccc
aagtgcatgcctcaactcattcccacgatgctctccctgctgaaggccatcgagccgaac
accatctacgccggctacgacagcaccctgcccgacacctccacccgcctcatgaccacc
ctcaacaggctgggtggccggcaggtcatctcagctgtcaagtgggccaaggctctgcca
ggttttaggaacctgcacctggacgaccagatgactctgctgcagtgctcctggctcttc
ctcatgtctttcggcctgggctggagatcttaccagcagtgcaacggcaacatgctctgc
tttgcgcctgaccttgtcatcaacgaggatcggatgaagctgccctacatggccgaccag
tgtgagcaaatgctgaagatttccagcgagttcgtccggctgcaggtttcccatgacgag
tatttgtgcatgaaggtcctgctgctgctcagcacagtgccaaaggacggcctgaagagc
caggcggtgttcgatgatattcggatgtcgtacatcaaggagctagggaaagccatcgtg
aagcgcgaggagaactccagccagaactggcagcgtttctatcagctcaccaagctgctc
gactccatgcatgagatggtcgggggactgctcagcttctgcttctacacctttgtgaac
aagtccctgagtgtcgagttccccgagatgctggcggagatcatcagcaaccagttacca
aaattcaaggctgggagcgtcaaacctctgctcttccaccagagatga
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