Pseudoliparis swirei (Mariana hadal snailfish): 130210272
Help
Entry
130210272 CDS
T09868
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 1-like
KO
K03260
translation initiation factor 4G
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130210272
03012 Translation factors [BR:
pswi03012
]
130210272
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
130210272
mRNA cycle factors
Stress granule specific factors
130210272
Translation factors [BR:
pswi03012
]
Eukaryotic type
Initiation factors
eIF-4
130210272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
eIF4G1-like_eIF4E-bd
Motif
Other DBs
NCBI-GeneID:
130210272
NCBI-ProteinID:
XP_056296280
LinkDB
All DBs
Position
20:complement(2664398..2698612)
Genome browser
AA seq
2016 aa
AA seq
DB search
MNKAPQPITGPPSIPHPAPSPGLSQPSFSPGPPPSVAFATPPPPQMNPAPQPRQFAPGPR
PMHQQGSFRSLQPYYTNRASLPPSSGPRGVPPNSDPRPVTPTHVYQPGPGSQMMMIPGQQ
LPFPSSPQGPAYFIPGQYRSATYVSTPQQYPVPTGTPGFYPGTNTAEYGTYAGAYYPAQT
QFTPSVQAAPVMNPAPQQQPQPPPQPPQHISTKRERKQIRIRDPNQGGRDITEEIMSGGR
SGSTPTPPQTAISESPTLVQSNGESITAAVTVVRPDDRGKPTPPPPSKTPELATGSPSPA
KALPFYTNTKPRAAPLPSEAAGVSLDTIPSPAPVADVMDAHRKATVTPQSAPEVPAYPAP
LPGPVPSAAAHKRTAAKKEALKEEAANTKEAAAVASLDTPPPSSAATNGVAEPEGPSVAA
PSRHTEAPPESPIAQPEELRLPNGLPLPAPRDTEVPAAAGSTERDDSPIAEPDVGEERVT
QTAVSVSQVAPREVTTPKAVTQVAPKAAMKAAPTAVTQVAPKAATHMAPKPVIKAAPSPA
TQVTPTAVTQTAEKAVIKGAPSPATRVTPTAATQTAAKPVIKAAPSPATRVTPTAATQTA
EKPVIKAAPSPATQVTPTAVTQMAEKAVIKGAPSPATRVTPTAATQTAAKPVIKAAPSPA
TQAVTIAVTPATPEPVTQAPPAAASEAPPTAVTQATAATEAAVSPAPPTAATEEPPTAAA
KATPTTVSPAPPTAATEEPPTAATPTTVSPAAPTAATKEPPTAAAPTTVSPAAPTATTEE
PPTAATKELPTAAAPTTVAQAAPLAAVEAAPASAEQPAPAVQEVPEAPVDPAAPAEPEVK
DAVPPVAPDIKEDAAVPDETSEETPSPAETVSTAAVEPAAAPATSSPAAEQREDTPPPPA
VTPALVEATMQAAVSVPKKKRKMKDLNKKEVVGDLLDAFKEEQVVSPPEPKPAPAAPETK
PPAASPPAPEEADLTWEDKEDKEGKLAAEKKYQYKEEQWKPINSEDKKHYDREFLLGFQY
SSASMNKPEGLPAISDVVLDQANKTPLRKMDFSRLQAMTCGPDFTPSFANLGRPGMGSGG
GGGGGGGGGGGSGGRGPPPGMGIGGPRRSQQMPRKELRKFITTMSLGEDIQLNKAEKAWK
PSAKKAVRSRAAEEPEDGDSESAKTQELFKRVRSILNKLTPQKFQQLMKQVTELTIDTEE
RLKGVIDLTFEKAISEPDFSVAYANLCRCLIGLKVETTENPETTVNFRKLLLNRCQKEFE
KDKDDDEIFELKQKELDAASVPEEKQRLTVELQQAKDVARRRSLGNIKFIGELFKLKMLT
EVIMHDCIVKLLKNHDAESLECLCRLLSTIGKDLDFEKAKPRMDQYFNQMEKIIKDKKTS
SRIRFMLQDVIDQRRNKWVSRRGDQGPKTIDQIHKDAEQEEHREQMKVQQALTYKKDPGP
GGRMGGGGGGGRGGSHNQGRGAPVQDEGWNTVPISKTRPIDTSRLSKITKTPVLDFNNQL
LAPGGKGTWGSWGKGSSGGTTAKPVESGPEPAGRPATSTINRFSALQQSAASSGPAAPES
DRRVPRRNSSSRERGGADRFDRDRNRLPITKRSFSRETEEREQRGSADPVRRVASMTDDR
GSRERARSKENVKRETAATPPPPPTPTKPALSEEELSKKSTAIIEEYLHINDMKEALQCV
QEMNSAQLLFVFVRNGLESTLERSTIVRERIGLLLQQLVKSNVLQRQQYYTGLQEILEVA
EDMSIDIPHIWLYLAEQITPMLHEGGIPMGDLFREISKPLVPQGQAGVLLVQILTLLCKG
MSHKKAGAMWREAGLRWKDFLPEDKDVNKFVTEQRVEFTLANDSEKEEEGERKELSPAEI
SKQLERLIQDQADDQRLFDWVEANLDEQQSSSSVFVRSLMTCVCQSAVVCENPNKVDGER
IKERAKVLHRYLKDEQLELQALYALQALMVQLEQPANLLRMFFDALYDEDVIKEEAFYKW
ETSKDPAEQQGKGVALKSVTAFFTWLREAEDESDNS
NT seq
6051 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcaccacagcctataacaggacccccctccatcccccaccctgccccctcc
cccggcctgtcacagccctcattctcccccgggccgcccccttctgtcgcgtttgccacc
ccaccgcctccacaaatgaacccagcacctcaaccccgacagtttgccccagggccccga
cctatgcaccaacagggaagcttcaggtcgctacagccctattacaccaacagggccagc
ctgccgcccagcagcgggcctcggggtgtccctcccaacagcgacccccggcccgtgacg
cccacccacgtctaccagccgggccccggctctcagatgatgatgatccccgggcaacag
ttgcccttcccaagctcgccgcagggccccgcctacttcatcccgggacagtaccggtca
gcaacctacgtgtccacacctcagcagtaccctgtcccgacgggcacccccggcttctac
ccaggaaccaacaccgctgaatatggtacttatgcaggggcctactaccccgcccagacc
cagttcaccccctcggtgcaggcggcgcccgtcatgaacccggccccccaacagcagccg
caacctccaccgcagcccccccaacacatctccaccaaacgggaacgcaaacagatcaga
ataagagacccgaaccaaggaggacgagacatcacagaggagattatgtccgggggccgc
agcggctctacccccaccccaccacagacagccatatcagaaagtccaacattggttcag
tccaacggtgagagcatcacagctgctgtcacagtggtcagaccagatgacagagggaag
cctacgccccctcctccgtcaaagacccctgaacttgcgacgggcagcccctcccccgca
aaggcgctccccttctacacgaacactaagccccgcgcggcgcctcttccgtcagaagcg
gcgggcgtctctctcgacactattccctctccggcgcccgtcgcagacgtgatggacgct
cacaggaaagccaccgtgaccccccagtcggcgcccgaggtgcccgcctaccccgcacct
ctccccggcccggtcccctccgccgccgcgcacaagagaaccgcagccaagaaggaggcg
ttaaaagaggaggcggctaacacgaaagaggcagcagctgtcgcctctctggacacgccc
cccccctcctccgccgccacaaacggcgtcgcggagccggaagggccgtcggtcgcggcg
ccgtctcgtcacacggaggcacccccggagtctcccatcgcacagccggaggagctccgc
ctccccaacgggctgccgctgccggccccccgagacaccgaggtgcccgccgccgccggc
tcgacggagcgcgacgacagccccatcgccgagccggacgtcggcgaggagcgcgtcacg
caaaccgccgtctccgtctctcaggtggcaccgagagaagtcactacacctaaagccgtc
acgcaggtggcacctaaagccgccatgaaagcggcgcctacagccgtcacccaagtggca
cctaaagccgccacgcatatggcgccaaagcccgtcattaaagcggcgccttcgcccgcc
actcaggtgacacctacagccgtcactcagacggcggaaaaggccgtgattaaaggggcg
ccttcgcccgccactcgagtgacacctacagccgccacgcagacggcggcaaagcctgtc
attaaagcggcgccttcgcccgccactcgagtgacacctacagccgccacgcagacggcg
gaaaagcccgtcattaaagcggcgccttcgcccgccactcaggtgacacctacagccgtc
actcagatggcggaaaaggccgtgattaaaggggcgccttcgcccgccactcgagtgaca
cctacagccgccacgcagacggcggcaaagcctgtcattaaagcggcgccttcgcccgcc
actcaagcggtgactatagccgtcactccggcaacgcctgagcccgtcactcaagcgccg
cccgcagccgcctctgaagcgccgcctacggccgtcactcaagcaacagccgccactgaa
gcagccgtctctccggcgccgcctacagccgccaccgaagagccgcctacagccgccgct
aaagcgacgcctacaaccgtctctcctgcgccgcctacagctgccactgaagagccgcct
acagctgcgacgcctacaaccgtctctcctgcggcgcctacagctgccactaaagagccg
cctacagctgcggcgcctacaaccgtctctccggcggcgcctacagccaccactgaagag
ccgcctacagccgccactaaagagctgcctacagctgcggcgcctacaaccgtcgctcag
gcggcgcctctagccgcagtcgaagctgcgcccgcctccgctgagcagcctgcgcccgcc
gtccaggaggttcccgaggctccggtcgacccggcggcgcccgccgagcccgaggtcaaa
gacgcggttcctccggtcgccccggacatcaaagaagacgccgcggtgccggacgagacc
tcggaggagacgccatctcccgcggagacggtttccacggccgccgttgagccggcggcg
gcgcccgctacctcgtctcccgcggcggagcagagggaggacacgcctcctcccccggcg
gtcacacccgccctcgtagaagctactatgcaagccgccgtgtcggtgccaaagaaaaag
aggaagatgaaggatctgaacaaaaaggaggtcgtgggagacctcctggacgccttcaaa
gaggagcaagtggtctctcccccggagcccaaaccggcccccgcggccccagagaccaag
ccccccgccgcctcccctccggcccccgaggaggccgacctcacctgggaggacaaggag
gacaaggagggcaagctggccgccgagaagaagtaccagtacaaagaagaacaatggaag
ccgatcaactccgaggacaagaagcattacgaccgggagtttctcctgggcttccagtac
agctcagccagcatgaacaagcccgagggtctgccggccatcagcgacgtcgtcctggac
caggcgaataagacccctcttcgaaaaatggacttcagtcgtctacaagcgatgacctgc
ggccccgacttcacgccctccttcgccaacctcggcaggcctggaatgggaagcggtgga
ggaggcggaggcggcggaggaggaggaggaggcagtggtggcagaggcccgcccccgggc
atgggcatcggcggcccgcggcgctctcagcaaatgccgcgcaaagagctgcgcaagttc
atcaccaccatgtcgctgggcgaggacatccagctgaacaaggcggagaaggcctggaag
ccctcggccaagaaggccgtccgcagccgcgccgccgaggagcccgaggacggcgactcg
gagagcgccaagacccaggagctgttcaagcgcgtccgcagcatcctcaacaagctgacc
ccgcagaagttccagcagctcatgaagcaggtgacggagctcaccatcgacaccgaggag
cggctgaagggcgtcatcgacctcaccttcgagaaggccatctccgagcccgacttctcg
gtggcctacgccaacctgtgccgctgcctcattgggctcaaagtggagaccacggagaac
ccggagaccacggtgaacttccggaagctgctgctcaaccgatgccagaaggagttcgag
aaggacaaagacgacgacgagatctttgagctgaagcagaaggagctggacgccgcctcc
gtgccggaggagaagcagcggcttaccgtggagctccagcaggcgaaggacgtcgcccgg
cggcggtcgctcggcaacatcaagttcatcggcgagctgttcaagctcaagatgctgacg
gaggtcatcatgcacgactgcatcgtgaagctgctcaagaaccacgacgccgagtccctg
gagtgcctctgcaggctgctgtccaccatcggcaaggacctggacttcgagaaggccaag
cctcgtatggaccagtacttcaatcagatggagaagataatcaaggacaagaaaacctcg
tccaggatccgcttcatgctgcaggacgtgatcgaccagcggcggaacaaatgggtgtcc
cggcgaggcgaccagggccccaagaccatcgaccagatccacaaagacgccgagcaggag
gagcacagggagcagatgaaggtgcagcaagccctcacctacaagaaggacccgggcccc
ggaggccgcatgggtggaggaggaggaggaggtcgcgggggctctcacaaccaaggccgg
ggcgctcctgtccaggacgagggctggaacacggtgcccatttccaagacccgacccatc
gacacctctcgccttagcaaaatcaccaagactcccgttctcgacttcaacaaccagttg
ctcgcccccggcggtaaaggcacgtgggggagctgggggaagggcagcagcggcggcacc
acggccaaaccggtagaatcgggcccggagccggccggccggccggccaccagcaccata
aaccggttctcggccttacagcagtcggcggcgtcctcgggcccggcggccccggaatcg
gaccgacgggttcctcggaggaacagctcgagtcgagagcgcggcggcgccgatcgcttc
gaccgcgaccgaaaccgcctgccgatcaccaagcgcagcttcagccgggagaccgaggag
cgagagcagcgcggctcggccgaccccgtccgccgcgtggcgagcatgacggacgaccga
ggcagccgggagcgagccaggagcaaagagaacgtgaagcgggagacggccgcgacccct
cctccgcccccgacccccaccaagcccgccttgagcgaggaggagctgagcaagaagtcc
acggccatcatcgaggagtacctgcacatcaacgacatgaaggaggcgctgcagtgcgtg
caggagatgaacagcgctcagctgctcttcgtgttcgtgcgaaacgggctggagtcgacg
ctggagcgcagcaccatcgtcagggagcgcatcgggctcctgctgcagcagctcgtcaag
agcaacgtcctccagcggcagcagtactacaccgggcttcaggagatcctggaggtggct
gaagacatgtcgatagacatcccccacatctggctgtacctggcggagcagatcaccccc
atgctccacgagggaggcatccccatgggagacctcttcagagagatctcaaagccgctg
gtccctcagggtcaggccggagtcctgctggtccagatcctcacgctgctctgcaaagga
atgagtcacaagaaggcgggcgccatgtggagggaggccggcctccggtggaaagacttc
ctccccgaagacaaggacgtcaacaagtttgtgacggagcagagagttgagttcacgctc
gctaacgactctgagaaggaggaggagggagagaggaaggagctgagccccgcggagatc
agcaagcagctggagaggctgatccaggatcaggccgacgaccagaggctctttgactgg
gtcgaggccaacctggacgagcagcagtcgtcctccagcgtgttcgtcagatctctgatg
acgtgcgtctgccagtcggccgtcgtctgtgagaaccccaacaaggtggacggcgagcgg
atcaaggagcgcgccaaggtgctgcaccgatacctgaaggacgagcagctggagctgcag
gcgctctacgcgctgcaggcgctgatggtgcagctggagcagccggccaatctgctgcgc
atgttcttcgatgccctctacgacgaggacgtgatcaaggaggaggcgttctacaagtgg
gagacgagcaaggacccggcggagcagcaggggaagggcgtggccctgaagtctgtcaca
gccttcttcacctggctgcgggaggccgaggacgagtccgacaacagctaa
DBGET
integrated database retrieval system
