Pseudoliparis swirei (Mariana hadal snailfish): 130210303
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Entry
130210303 CDS
T09868
Name
(RefSeq) protein Smaug homolog 2
KO
K27396
protein Smaug
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130210303
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
130210303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
130210303
NCBI-ProteinID:
XP_056296370
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All DBs
Position
20:18359765..18373262
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AA seq
673 aa
AA seq
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MMFRDQVGILTDWFKGWNECEQTVALLSLLKRVSRTQARFLHICLEHWLADCTEIHILEA
EANNAAIVSQWHQEPKEKVVSLLLSHLPLLQPRNSEAKCEYMKLLQKVLSHTIESSLFVE
ESRQLLSYALIHPATTLDDRTSLAMWLNHLEEHLSSGYAPRPPSSPYHPRQGSDEWPSST
EALDPGLAWHEQSPSSSTSPAGQNGHMPFPGGISSPINSNNTGLGGQMQPSPLKKAMSLI
PSSPQACVSEWVSHDDIGGRQNFILTDHAPLSPQSSVASSGSEQTDEQGSSRNTFHEDGS
GMRDVPAWLKSLRLHKYASLFSQMTYDEMMILTEHHLESQNVTKGARHKIALSIQKLRER
QSVLKSLEKDILEGGNLRNALQELQQIIVTPMKACGLPSAAPIAPDAATSPTDATQTGAD
KEPASEGFQSHHPPPCDGDSSATPISDGDIAGQFTRVMGKVCTQLLVSRPDEENISCYLQ
LIEKCLTHEAFTETHKKRQVSWKQQVLKLLRLFPRKAMLDMPVYRQKGWTYGSNSLPTAG
SVSGVVGRRGQRPFQLTPRGLPAGRIGLLSPGGIGGASPRHTLTNPALAGQGRQNLWFAN
PGGSNSMPSQSRSSVQRTHSLPVHTSPQTMLMFQQQECQVPGADLEINPTLESLCLSMTE
HALGDGTDRTSTI
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgagaccaggtaggtatcctcacagattggttcaagggctggaatgagtgt
gaacagacggtggcactgttgtccctcctgaagagggtgtcccgcacccaagctcgcttc
ttacacatctgccttgaacactggctggcagactgcacagagatccacatcctggaagct
gaggccaacaatgcagccattgtcagccagtggcatcaagagccgaaggaaaaagttgtg
tccttgctgctctcccacctgcctctgctgcagccacgcaacagtgaggccaaatgtgag
tacatgaagctgctgcagaaggtgttgagtcacacgattgagagtagcctgtttgtggaa
gaaagcaggcagctgctgtcctatgcgctcatccaccctgccacaacactggatgaccgc
acctctctggccatgtggctaaatcacctagaggagcacctatccagtggctatgccccc
cgacccccatctagcccctaccatccgcgtcagggctcagatgaatggcccagctccact
gaggctctggaccccggcctcgcgtggcacgaacagtccccctcatccagtacgtctcca
gcaggccagaatggacacatgcctttcccaggcgggatctcctctcccatcaacagcaat
aacacaggtctgggtggacagatgcagcccagccctctaaagaaggccatgtccttgatt
ccttccagtccccaggcttgtgtctctgagtgggttagccatgatgacatagggggcagg
cagaacttcatcctcacagaccacgctcccctctcaccccaaagcagcgtcgcctcctca
ggcagtgagcagacagatgaacaaggctccagtcgcaacaccttccatgaggatggcagt
ggcatgagagatgttcctgcgtggttgaagagtctccgtcttcataaatacgcatcactt
ttttcccagatgacctatgatgagatgatgattctcacagagcaccacctggagtcgcag
aacgtcactaaaggagcacggcataagatcgccttgagtatccagaaactgcgagagagg
cagagtgtgctcaagtctttagaaaaggatattttggaagggggcaacctgcgtaacgcc
ctccaggagctgcaacagatcattgtcacgcccatgaaggcctgcggccttcccagtgcg
gcaccgattgccccagatgcagccacctccccgacagacgccacacaaacaggagcagac
aaagagccggcctcagagggcttccagtcccaccacccccctccctgtgatggagactcc
tcagccacacccatctcggacggcgacattgctggacagttcacccgtgtcatgggtaaa
gtgtgcacccagttgctggtgtcaaggccagatgaggagaatatcagctgttaccttcag
cttattgagaagtgtctgactcatgaggccttcacagaaactcacaagaaaaggcaggtt
tcctggaagcagcaggtcctcaaactgctccgcctgtttcctcggaaagctatgctggac
atgcctgtgtaccgacagaaaggctggacctatgggtccaactccctccccacagcaggc
tctgtgagtggagttgtagggcggcggggacaaaggccgttccagctgactcctcgtgga
cttccagccggacgcatcggtcttctgagtcccggcggcatcgggggagcgtctccgcgc
cacacactcactaatcctgcgctggcaggccaggggagacaaaacctgtggtttgctaac
cctgggggcagtaacagcatgccgagtcagagtcgcagctctgtgcagcgaacccactcg
ctccctgttcacacctccccgcaaaccatgctcatgttccagcagcaagaatgccaagtt
ccgggtgctgacctggagatcaaccccacgctggagtcactgtgcctcagtatgacagag
catgccttaggggatggaacagaccggacatcaacaatatga
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