Pseudoliparis swirei (Mariana hadal snailfish): 130210304
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Entry
130210304 CDS
T09868
Symbol
socs9
Name
(RefSeq) suppressor of cytokine signaling 9
KO
K04698
suppressor of cytokine signaling 5
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130210304 (socs9)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
130210304 (socs9)
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Motif
Pfam:
SOCS
SH2
SOCS_box
Motif
Other DBs
NCBI-GeneID:
130210304
NCBI-ProteinID:
XP_056296371
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Position
20:18373307..18376664
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AA seq
560 aa
AA seq
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MSLPKESGNRGKDRERGARPKVRQSRSEERRDPGSGRKGVKGKKKGRSSHEPAAERPVSD
GFEYGDMLSDLDSKDQSSPSSLKEHLRWQGLEAASFLRQERVTSRPELGTISSAPDIPGA
GEGESRASSSSRTLRQKIQDAMGQCFPIKTHSATAAAPSPQALSSTACASSRRKIHLSEL
MLDDCPFPVGSELAQKWYLIKQHTAPITQPPSLDPAVVCVAPAAVTATAVEDVDDRLRER
RRISIEQGVEPPPNAEIHTFEVTAQINPLYKHGPKLAPGMNELAEAERATGQQQLLLQRQ
QQHHQLLLQSCLDTLDEVVASASASAHTSDSASASAHTSDSASASAHTCDSTPEPVVDSE
VPAPDEPSRVLLPPAEDPASHDGYRIHTQIDYIHCLVPDLLQITSLPCYWGVMDRYEAET
LLEGKPEGTFLLRDSAQEDYLFSVSFRRYGRSLHARIEQWNHNFSFDVHDPSVFHAPTVT
GLLEHYKDPNSCMFFEPLLSNPIHRAQPFTLQHVCRAVVSSRTTYDGVNVLPIPNTLKKH
LKEYHYKQRVRVRRMDTWWE
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtccttaccaaaggagtcagggaaccgaggtaaagatcgagagaggggggcccgtccg
aaggtgagacaaagccggtcagaggaaagacgagatccaggcagtggacggaaaggtgta
aaggggaagaaaaaaggccgttcttcccatgaaccagcagctgagaggcccgtcagtgat
ggctttgaatatggtgacatgttgagtgacctcgactccaaggaccaatcttccccctcg
tctttgaaggaacatttgagatggcaggggttggaagccgcctcatttctcagacaagaa
cgggtcacgtcccggccagaactgggaacgattagctctgctccagacatacctggagcc
ggtgaaggtgagagcagagcgtcaagcagcagccgcactcttcggcaaaaaatccaagat
gcaatggggcagtgtttcccaataaagacgcacagtgcgactgcagcagcaccatctccg
caggctctttcctccactgcctgcgcctcctcgaggcgcaagatccacctcagcgagttg
atgttggatgactgccccttccccgtcggatcggagctggctcagaagtggtatctcatc
aagcaacacacggcccccattacccagcctccctcgctcgatcccgcggtcgtgtgcgtc
gcccccgccgccgtcacggcgacggcggtggaagacgtcgacgaccggttgcgggagcgc
aggcgcatcagcatcgaacaaggcgtcgagccgccgcccaatgcagagatccacacgttt
gaggtcacggcccaaattaatcctctctacaagcacggccccaagctggctcctgggatg
aacgagttagccgaggctgagagagccaccggtcagcagcagcttctcctccaaaggcag
cagcagcaccaccagctccttctgcagagctgcctggacacgctggatgaggtggtggcc
tcagcctctgcctcagcccacacctctgactcggcctcagcctctgcccacacctctgac
tctgcctcagcctcagcccacacctgtgactctacccccgagcctgtggtggactctgag
gtcccggcgcccgacgagccctctcgagtcctcctcccgccggccgaggaccccgcgtct
cacgacggctaccgcattcacactcagattgattacatccactgtttggttccggacctg
ctgcagatcaccagcctgccctgctactggggggtgatggaccgctacgaggccgagacc
ctgttggaggggaagcccgaaggcaccttcctcctgcgcgactccgctcaggaggactac
ctcttctccgtgagcttccgccgctacggccgctcgctgcacgcgcgcatcgaacagtgg
aatcacaactttagcttcgacgtgcacgacccgagcgtgttccacgcccccacggtgacg
gggctcctggagcactacaaggaccccaactcctgcatgttcttcgagcccttgctgtcc
aaccccatccaccgggcgcagcccttcaccctgcagcacgtctgccgagcggtcgtcagc
agccgcaccacctacgacggcgtcaacgtgcttcccattccgaacactttgaaaaagcac
ctgaaggaataccactacaagcagagggtacgcgtccgccgaatggacacctggtgggaa
tga
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