Pseudoliparis swirei (Mariana hadal snailfish): 130210332
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Entry
130210332 CDS
T09868
Symbol
capns1b
Name
(RefSeq) calpain small subunit 1b
KO
K08583
calpain, small subunit 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pswi01002
]
130210332 (capns1b)
Peptidases and inhibitors [BR:
pswi01002
]
Cysteine peptidases
Family C2: calpain family
130210332 (capns1b)
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Gene cluster
GFIT
Motif
Pfam:
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
EF-hand_5
CAPN13-like_C_EFh
EH
Cbm74
Motif
Other DBs
NCBI-GeneID:
130210332
NCBI-ProteinID:
XP_056296443
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Position
20:22161763..22170750
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AA seq
216 aa
AA seq
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MFFARSLIKGIIDVVSDFDPSQFKTSDPPPPRRPLNFGDSHENEEENKFRRVFKQLAGED
MEVSPNELMNILNKVLGNHENLKTDGFSIESCRSMVAVMDSDSTGKLGFHEFKYMWNNIK
KWQAIYLKYDADGSGTIGFDELPNAFQAAGFPLNDQLYKLIIRRYSDEHGSMDFDNFVGC
LVRLDAMCRAFKTLDKDNSGSIDLDIKEWLQLTMYS
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgttttttgcaaggagcttaatcaaaggcatcattgatgttgtgagcgacttcgacccg
agtcagttcaagacctcagaccctcctcctcctcgcagacctctgaactttggcgattcc
cacgagaacgaagaggagaacaagtttcggagagttttcaagcagctggccggagaggac
atggaggtgagccccaacgagctgatgaacatcctcaacaaagtccttggcaatcatgaa
aacctgaagaccgacggtttcagcatcgagtcctgcaggagcatggtcgcggtcatggac
agtgacagcacaggtaaactcggcttccacgagttcaaatacatgtggaacaacatcaag
aagtggcaggcgatctatttaaaatacgatgcagatggttcaggtacaatcggctttgat
gagctgccaaatgccttccaggctgcaggtttccctctgaatgaccagctctacaagctg
attatccgtcgctatagcgatgaacacggcagcatggacttcgacaatttcgtcggctgc
ctggtgcgactggacgccatgtgcagagcctttaagaccctggataaggacaacagtggc
tccatcgacctggacatcaaggagtggcttcagctgacgatgtactcataa
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