Pseudoliparis swirei (Mariana hadal snailfish): 130210338
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Entry
130210338 CDS
T09868
Symbol
tnfaip1
Name
(RefSeq) BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2
KO
K15074
BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130210338 (tnfaip1)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
130210338 (tnfaip1)
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Gene cluster
GFIT
Motif
Pfam:
BTB_2
BTB
DUF7325
Motif
Other DBs
NCBI-GeneID:
130210338
NCBI-ProteinID:
XP_056296452
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All DBs
Position
20:2055584..2060469
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AA seq
311 aa
AA seq
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MSGDSRPPQRHTHSASPAPPPAGPKTKSCSYRGAVGLGNKYIRINVGGSLFYATLPVLTR
HSSLLKAMFSGQKDVFTDKDGWILIDRSGKHFGSVLCFIRDGSVSLPKGRQAVQEVLAEA
KYYDVQGLVELCHNTLQGNKELPMCVIPVVTSSKEEEKLIQSSAKPVVKLVYNRSNNKYS
YTSNSDDHLLKNIELFDRLSLSFNGRVLFIKDVIGDEICCWSFYGQGRKLAEVCCTSIVY
ATEKKQTKVEFPEARIYEETLNTLLYETMSPDAVLLEASEEDEGPGGARRLHVKRHSAYD
DRQPDIVTPFL
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtccggggacagccgccccccccaacgccacacccactccgcctccccggcccctccc
ccggccggccccaagaccaagagctgcagctaccgcggcgcggtgggcctgggcaacaag
tacatccgcatcaacgtgggcgggagcctgttctacgccacgctgccggtgctcacccgg
cacagctccctgctgaaggccatgttcagcggacagaaggacgtgttcaccgataaagac
ggctggatcctgatcgaccgcagtgggaagcacttcggcagcgtcctgtgcttcatacgc
gacggctcggtctctttgcccaaaggtcgccaggcggtccaggaggtgctggccgaggcc
aagtactacgacgtccagggcctggtggagctttgccacaacacgctgcagggcaataag
gagctgcccatgtgtgtcatacctgtggtcacctccagtaaggaagaggagaagctcatc
cagtcctccgccaagcctgtggtgaagctggtgtacaacagaagcaacaacaagtactcc
tacaccagcaactccgacgaccacctgctgaagaacatcgagctgttcgaccggctgtcc
ctcagcttcaacggccgcgtcctcttcatcaaggacgtgatcggagacgagatctgctgc
tggtccttctacggccagggccgcaagctggccgaggtctgctgcacctccatcgtctac
gccacggagaagaagcagaccaaggtggagttccccgaggctcgcatctacgaggagacc
ctgaacacgttgctctacgagacgatgtcgcccgacgccgtgctgctggaggccagcgag
gaagacgaggggcccggcggcgcccggcggctccacgtcaagaggcacagcgcgtacgac
gaccggcagccggacattgtgacgccgttcctttaa
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