Pseudoliparis swirei (Mariana hadal snailfish): 130210355
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Entry
130210355 CDS
T09868
Symbol
bicra
Name
(RefSeq) BRD4-interacting chromatin-remodeling complex-associated protein isoform X1
KO
K25612
BRD4-interacting chromatin-remodeling complex-associated protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130210355 (bicra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130210355 (bicra)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Chromatin remodeling factors
GBAF(ncBAF) complex
130210355 (bicra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLTSCR1
Motif
Other DBs
NCBI-GeneID:
130210355
NCBI-ProteinID:
XP_056296496
LinkDB
All DBs
Position
20:13130880..13143805
Genome browser
AA seq
1873 aa
AA seq
DB search
MDDEDGRCLLDVICDPEALNDFLHGSETHLDTDDLLDGSSDPSSSFFSTAGGHVPEVQPA
VQLSVNEPAGLPRVSVDLDFLEDDDILGGSPGGEGGSNGVGTNHEPCDILQQSLAEANIT
EQSLQEAEAELDLGSFGIPGLTQVVQTLPDGSLSGAGGTAVGVGVGVGGAASIFPESAPS
TTAPTHNATADMLGSVLVQQGLQLQPQVMNKAINVQPFMQPMGLGNVTLQPISSLQTLPN
GSQSGHLGIGQIQVVGQPTVMTINQSGQPILAKAMGGYQLHQSGPEVSGAGSQAGLGGSG
GGLLIQGNKATLGSPALNGPAVCVSSTNSSSGGTMTAPAGLLGFGSTTLSSGMGPQMQTQ
GQIMQIIQRTPTPIQPKPPQGGAIQPKLFKQQQQQQQQQQQQQHPQPAPQPLQNDAQKAL
GLQHIPVSAAQNVAFLTGKPGSNVVLSTQATTQGQQFQQTLFKQQAAQPSGKPLSVHLLN
QQGSIVIPSQTVLQGQNHQFLLPQLQAGGQILTQHPGGHIITSQGPGGQLIANQILTANQ
NINLGQMLTSQGHPGAAHILSGSIQLQPGQMGTPTLFQMPVSLAQSQNQTQTHTVSGHAQ
TVIQGMPIQNSLTVLSQVEGLSPAVSLQPALQPQLGGVPSNSSSTGAATMAQGQPGECVT
VLGSSTDQAAHPSQQHAAQSSILAMQPGSSVSTITTVPSSSPSMSVSTSSSVTAVGLVPH
QAQHSPGRLLFTNQGSSMILSQESLQMFLQQEQHHQSENESTPSAGVPASVIVSSNSITA
PVPAVPDSQLTDSWVGQSHSPPPGPSHMTAVVNQVPSGHQQSLKIQGMSPALSAHATLPM
VADSPQPSQSPLTLTQQIQSPHHQQQSRPSSQPQPQSQTPSRSCTPSNHPQLFIVHNQMA
ESPQTAQQGQPQQTHIQVQLQPQPRPASQPAPYQQDMPPMSQSPKPPPTPPSQHQFTVLP
ISTPATAVVKAQVPIQCLTAEQQHHLQLIGAQLQTLSTIAQPSLQQKQLLEKLHQVQHSI
LLQAQQSTQPQVTSQFSSQQDVPVDEAVMAPSANTGPPAQLLSVLQPTPLLVKTPATASS
DLQVFSGAQGSAGAMVNQTVIPASLTQPVQVQPKPGVISSVGGITLGKGMQIQVLGGSLT
QMPGPQPPAPVQTQTTTMKMPFSAEPSKEARMLEQLRKQQGSVLHPNYSAPFHSVEDTLH
RLLPYHLYQGTANSSLDYQRVDDEFETVSSQLLKRTQAMLDKYRSLLFAESKVFKPEQRL
GPSAEMVMIDRMFIQEEKIALSQDRILAKERPEEFVANARMLGSIVSSQHKSSSAEATSF
SGGVPAAVPAPSSAAPAPLSNIAPNPPSAPTPAPVPAPAPAPPSTNPFPPTKLVIKQGGG
GASVSWSSSCPAAATSRLAERNSQSSSFSRASTASSSFSSSSFKSSAADDDDALPQRTNK
PPLKTYEARRRIGLKLKIKQDQTGFSKVVHNTALDPVHTPQPQQSSQSIPHTKTQPQFEA
AVPNPKSQPLSTPPSTVIRTQPPVSTASSASSLATTTTQCNPPLRGSVAPIVAPSSSTSS
SHTWSSSTSSSTQMNGTLDHDNVSRVKHNSASTVTPSQTTCRLPLRKTYRENISPRVRPG
VPGGGDESLSYPRPTPSPPRQEASPSPPSERTVIASVKVEKRGREASHTHAESSHETGRL
GSAMQGLDEMDEVFNRGIKTAHHHRVPQLLDREGAKERGEELMDSDVSKYKMVKHRHRAG
GTFRMDPGPPSPESSFTRDSLLPAKRCKSDSPDMDNASFSSGSPPDDTLDEHLQCAIDSI
LNLQQEPSARGHHIKGGNSRSHQSQRPGGSAASSHRPSVPPSSSASSSSSLAQHPQVGGR
GHNGSLVPQTQSR
NT seq
5622 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaagatggcaggtgccttctagatgtaatttgtgacccagaagctctcaat
gactttcttcatggatctgagacccatttggacactgacgacctattggatggttcgagt
gacccctcaagctcgttcttctctaccgctgggggccatgttccagaggtccagcctgca
gtccagttgtctgtcaatgagccagcaggcctacccagagtcagtgttgacctggacttc
ctggaggatgatgacatcttgggaggttccccgggtggtgaaggtgggagcaatggggtt
ggaacaaatcacgagccatgtgacatcctgcagcagagcttggctgaagccaacatcaca
gagcaaagcttacaggaggcagaggctgaactggacctgggctcctttggcattcctggc
cttacacaggtggtacagacactgcctgatggcagcctctctggggctggaggcactgcc
gttggtgtaggcgttggtgttgggggagcagcatcaattttccctgagtcagccccgagc
accacggctcctactcacaatgccacagctgacatgctggggtccgtgcttgttcagcag
ggccttcaacttcaaccccaggtcatgaacaaggccattaatgtgcagccatttatgcag
cccatgggcctgggaaatgtgactcttcaacccatttcaagtctccaaactcttcccaat
gggagtcagtctggacatttgggtatcggacagattcaggttgtgggtcaacctacagtc
atgactatcaatcagtctgggcagccaatcctggctaaagccatgggtggttaccagctg
caccagtctgggccagaggtatccggtgctggttctcaggcgggacttggaggctcaggg
ggtggacttctgatccaaggtaacaaagccactttgggatctccagctttaaatggaccg
gctgtttgtgtcagcagcacaaacagcagcagtggcggtacaatgacggctcctgctggg
cttcttggctttggcagcaccactctaagttcaggaatgggaccccagatgcaaactcaa
ggccaaataatgcagatcatccagcgcacaccaacacccattcagcctaaaccccctcag
gggggagccatccagccgaaactcttcaaacaacaacaacagcagcagcagcagcagcag
cagcagcagcacccacagccagcaccccaacccctgcaaaacgatgcccaaaaggcttta
ggactacaacacattccagtttctgctgctcagaatgtggccttcctgacaggaaagcca
ggctcaaatgttgtcctaagtactcaagcaacaacacaaggacaacagtttcagcaaacc
ctattcaagcaacaagcagcacaaccatctggcaagcccctcagtgtacacttgttaaac
caacaaggcagcatcgttattccctctcagacagttctccaaggtcagaatcaccagttt
ctcctgccacagctacaggcaggtgggcaaatcctgacccagcaccctggggggcacatc
attactagtcagggacctggtggacagctcatcgcaaaccagattttaactgcaaaccag
aacatcaacttaggtcaaatgttgacttcacagggccatccgggggctgcccacatccta
tctggatccattcagctccaacctggccagatgggcacacccaccctctttcagatgccg
gtctcattggcccagagtcaaaaccagacacagacccacacagtctcaggtcatgcccag
acagtcatacagggcatgccgatccagaactcccttaccgtgcttagccaggtggagggg
ctgagtcctgcggtcagccttcagccagccctgcaacctcagctcggtggtgttcccagc
aacagcagcagcacaggagctgcaaccatggctcaaggccagcctggagagtgtgttact
gtactgggtagctccacagaccaggctgctcatccctctcaacagcatgcagcgcaatcc
tctatcctcgccatgcaaccagggtcctctgtgtccacgattaccacagtaccctcttct
tctccgtccatgtctgtgtccacctcttcctctgtcacagccgtggggctggtcccccat
caggctcagcacagtccagggaggttactgttcaccaaccagggctccagtatgatcctg
agccaggagtctctgcagatgttcttgcaacaggagcagcaccaccaatcagagaatgag
tcgaccccctctgcgggcgtacctgcgtctgtaatcgtcagcagcaacagcatcactgct
ccggtccctgctgtccctgacagccaattaactgactcttgggtgggtcagagccacagc
cctccccccggcccctcccacatgacagctgtggtaaaccaggtacccagtggacatcag
cagtcactgaagatccaaggcatgtcaccggcattgtccgctcacgccacgttacctatg
gtggcagacagcccccagccttcccagtctcctctcactctgacccagcagatccagtca
ccgcaccatcagcagcagtcgcggccatcctctcagcctcagccgcagtctcaaactccc
tcccgctcgtgcacaccctcaaatcatcctcagctctttattgtacataaccagatggca
gagtccccccaaaccgctcagcaaggccagccgcagcagacacacattcaagttcagctt
cagcctcagccacgaccggcctcgcagcccgccccttatcaacaagatatgcctcccatg
tcacagtcgcccaagcctcctcctacaccaccttcacagcaccagtttactgttcttcct
atcagcacgcctgccactgctgtagttaaagcccaggttcccatccagtgtctgacagca
gagcagcagcaccacctgcaactaataggagcgcaacttcagaccctgtcaaccatcgcc
cagccctcacttcagcagaaacagctgctggagaagctacaccaggttcagcatagcatc
ctgctgcaggcccagcagtcgactcagcctcaagtcaccagtcagttcagctcccagcaa
gacgtgcctgtggatgaagcggtgatggcaccatcggccaacaccggtccacctgctcag
cttctctcggtgctgcagccaacgccgttgctcgtcaaaacgcctgctacagcatcaagt
gacttacaggtattctcaggagcccaggggtcagctggagcaatggtgaatcagactgtt
attcctgccagccttacccagcctgtacaggttcagccaaagccaggggtgatcagctca
gttggagggataactctggggaaaggaatgcagatacaggtgttgggcgggagtcttact
cagatgcctggtccacagcccccagctccagtccaaacgcagacgacaacaatgaagatg
cctttcagtgcagagcccagcaaagaggccaggatgctagaacagctgaggaaacagcag
ggctcagtacttcacccaaactacagtgcacctttccactctgttgaggacacactgcac
agactgctgccttaccacctctaccagggaactgccaactcctctctagattatcaaaga
gtggatgatgaatttgagaccgtctccagccaactgctgaaaaggacccaggccatgctg
gataagtatcgctccctgctctttgcagagtcaaaagtgtttaaacctgagcagagattg
ggcccctcggcagagatggtgatgatagaccggatgttcattcaggaggagaagattgcg
ttgagtcaggacaggattttggccaaggagagaccagaggagtttgtggcaaatgcacgc
atgttggggagtatcgtttcatcccaacataaatcctcttctgctgaggccacgtccttc
agtggaggtgtaccagctgctgtccctgctccatcatctgctgccccagcccctctctca
aacattgccccaaatcctccttctgcgcccacccctgctccagttcctgccccagctcca
gcacctccttccaccaaccctttcccccctaccaaactagtaataaagcagggtgggggc
ggagcctctgtctcgtggtccagcagttgtcctgcagctgcaacgagcaggctggctgaa
cgcaacagccagagctcctccttcagtcgcgcttcaacagcgtcctcctccttctcctct
tcgtccttcaagtcttcggcggccgatgatgacgacgctctcccacaaagaaccaacaaa
ccgccgctgaagacctacgaggctcgcaggagaattggcttgaagctgaaaatcaaacag
gatcaaacggggttcagtaaggtggttcacaacacggccttagacccagtgcacacacca
cagcctcagcagagcagccagtccattccccacacgaagactcagccccagtttgaagct
gccgtaccgaacccaaagtcccaacctctatcaacccctccttctacagtcatcagaact
cagcctcctgtaagcactgcttcttctgcctcatcgctggccacaacaaccactcagtgt
aacccaccactgagaggaagtgttgcccccattgtagccccatcttcctctacctcttcc
tcccacacgtggtcatcgtccacctcctcctctactcaaatgaatgggacattggatcac
gacaacgtgagtcgggtcaaacacaattctgcctccactgtcactccctcacagacaacg
tgccgtctcccccttcgaaaaacctaccgggaaaacataagtccccgggtgagacctggt
gtcccagggggaggagacgaaagcttgtcctacccgaggcccacaccgtcacccccccgg
caggaggcctccccctctcccccctcagagcggacagttatagccagtgtgaaggtggag
aaaagaggcagggaggcctcacacacccacgcagagtcaagccacgaaacgggccgattg
gggagtgcaatgcaggggctggacgaaatggacgaggtgtttaaccgtggtatcaaaact
gcacaccatcatcgtgtcccacagctcctagacagggaaggggcaaaggagagaggggag
gagctcatggactcggatgtaagtaaatacaagatggtgaaacatagacatagggcaggt
gggacattcagaatggaccctgggcctccctctccggagtcgtccttcacacgagactct
ttgcttcccgcgaagcgctgcaagtccgactctcccgacatggataacgccagcttctcc
agcggcagccctccggatgacactctagacgagcacctgcagtgtgctatcgacagcatc
ctcaacctgcagcaggagccctctgcccgcgggcaccacattaaagggggcaacagcagg
tcacaccaaagccagcgcccagggggctcggcagcatcatcgcacagaccctcagtacca
ccctcctcctctgcttcctcgtcctcctccttggcccagcaccctcaggttggtggccgt
ggccacaacggcagcctggttccccagactcaaagcagataa
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