Pseudoliparis swirei (Mariana hadal snailfish): 130210409
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Entry
130210409 CDS
T09868
Name
(RefSeq) sodium/calcium exchanger 2-like isoform X1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04020
Calcium signaling pathway
pswi04260
Cardiac muscle contraction
pswi04261
Adrenergic signaling in cardiomyocytes
pswi04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
130210409
04020 Calcium signaling pathway
130210409
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
130210409
04261 Adrenergic signaling in cardiomyocytes
130210409
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130210409
00536 Glycosaminoglycan binding proteins [BR:
pswi00536
]
130210409
Transporters [BR:
pswi02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
130210409
Glycosaminoglycan binding proteins [BR:
pswi00536
]
Heparan sulfate / Heparin
Others
130210409
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
130210409
NCBI-ProteinID:
XP_056296654
LinkDB
All DBs
Position
20:11273592..11446933
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AA seq
984 aa
AA seq
DB search
MSVLASPAPGLLLLPLLLFLIPLPPCQTESQRGDLSSSDPSSDPEYRAVSPSMFPSSFSP
YMSYANSTGPGIKEKCGEVSVCRPGILLPVWQPNRPGVGEQVARAVVYFASLMYMFMGVS
IIADRFMASIEVITSQEKEVTITMPNGETSVATVRIWNETVSNLTLMALGSSAPEILLSV
IEVCGHNFEAGEIGPSTIVGSAAFNMFVIIGICVWTIPAGETRKIKHLRVFFITAFWSIF
AYIWLFLILYVISPGVVEVWEALVTLLYFPVCVLLAWIADRRLLFYKYMGKRYRADKRHG
IVVETEGDPTPNKGGMEMIIDGKFTPRGGAVMPAENCGVGTQDGAVGAVPNNVGLPNSNS
AMVNMESSKELDESRKEVIRILKELKQKYPDKELDQLVELANYYALLHQQKSRAFYRIQA
TRMMIGAGNVLKRHAAENARRTAVTDEEAPEEEDLGDYSRISFESAHSQCMENCGKLTLA
VVCHGGLGENTFYVDYRTEDGSANAGSDYEYREGTLVFKPGETRREIKVGIIDDDIFEED
EHFFVRLLNLRVGDAEGMFESDEVGAAPKGRLMEPLVTTVTILDDDHAGIFTFRERMVRV
SESVGTMEVTVVRNSGARGTVILPYRSESGTAKSGKDYEDARGELEFNNDQTIQTFQVRI
IDDEEYEKHENFFIVLEEPRWLKRGISALLLNQEGAEGQMSAEGEEARRIAEMGKPILGE
HSRLEVVIEESYEFKSTVDKLIKKTNLALVIGTHSWREQFVEAVTVSAGDGDDDEGCEER
LPSCYDYVMHFITVFWKVLFACVPPTECWNGWACFLVSISSIGLLTAFIGDLASHFGCTV
GLRDTVTAVVFVALGTSIPDTFASKVSAMQDQHADASIGNVTGSNAVNVFLGIGVAWSVA
AIYWRIKGEEFKVDPGSLAFSVTLFTVFAFICMGVLMYRRRPSIGGELGGPRGARLVTCL
LFLGLWFLYILFSSLEAYCHISGF
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcttggcctcacccgcacccggcctcctcctcctccccctcctcctcttcctc
atcccgctgcctccctgccagacggagtcccagcgcggcgacctcagcagcagcgacccg
agcagcgaccccgagtaccgagcggtctcgccctccatgttcccctcctccttctcccct
tacatgtcctacgccaacagcaccgggcctggcatcaaggagaagtgcggggaagtgtcg
gtgtgcaggcccggcatcctgctgcccgtctggcagccaaaccggcccggggtcggcgag
caggtggccagagcggtggtctactttgcgtcactcatgtacatgttcatgggagtgtcc
atcatcgcagaccgcttcatggcgtccatagaggtcatcacgtcccaggagaaagaggtg
accatcaccatgccgaacggggagacgtcggtggcgacggttcgaatctggaacgaaacg
gtgtccaatctgacgctcatggctctcggctccagcgctccggagatactgctgtctgtt
atagaggtgtgcggccacaacttcgaagccggcgagattggcccatcgaccatcgtcggc
agcgccgccttcaacatgttcgtgatcatcgggatctgcgtgtggacgatccccgcaggc
gagacccgcaagatcaagcacctgcgggtgttcttcatcaccgccttctggagcatcttc
gcctacatctggctcttcctcatcctgtacgtcatatcgccgggcgtcgtggaggtgtgg
gaggccctggtcaccttgctgtacttccctgtgtgtgtactcctggcctggatcgctgac
cgccgcctgctcttctacaagtacatgggcaaacgctaccgcgccgacaagcgccacggc
atcgtcgtggagaccgagggagacccgacacccaacaagggcggcatggagatgatcata
gacggcaagttcacgccgcgggggggcgccgtgatgcctgccgagaactgcggagtcggg
actcaggacggcgcggtgggcgccgtgcccaataacgtcggcctgcccaactccaacagc
gccatggtgaacatggagagcagcaaggagctggacgagagccgcaaagaggtaattcgt
atcctgaaggagctgaagcagaagtatccagacaaagagctggaccagctggtggagctg
gccaactactacgctctgctgcaccaacagaagagcagggccttctaccgcatacaggcg
actcgcatgatgatcggagccggtaatgtcctgaagaggcacgcagccgagaacgcgcgc
cgcacggcggtgaccgacgaggaggcgccagaagaagaagacctgggagactacagccgc
atctccttcgaaagcgcccacagccagtgcatggagaactgcggcaagctgacgctggct
gtggtctgccacggaggtctgggagagaacaccttctacgtggactacaggacggaggac
ggctcagccaacgccgggtcggactacgagtaccgcgaaggaacgctggtgttcaaaccc
ggagagacccgcagggagattaaggtcggcataatcgacgacgacatattcgaagaggac
gagcacttcttcgtgcgcctgctgaacctacgtgtcggcgacgcagaggggatgtttgag
agcgacgaggtgggcgccgcccccaaaggtcgcctgatggagcctctggtcaccacggtg
accattctggacgacgaccatgccggcatcttcacgttcagggagcgcatggtgcgggtc
agcgagagcgtgggcaccatggaggtgacggtggtgcgcaactccggcgcccgcggcacc
gtcatcctgccgtaccgcagcgagtcgggcaccgccaagtctggcaaggactacgaggac
gcccggggagagctggagttcaacaacgaccagaccattcagaccttccaggtgaggata
attgatgacgaagaatacgagaaacatgaaaacttcttcatcgtgctagaggagccacgc
tggctgaagagaggaatctcagcgctgcttctcaaccaagagggagcggaggggcagatg
agcgcagagggggaggaggcccggaggatagctgagatggggaagcccatcctgggagag
cacagccgcctggaggtggtcatcgaggagtcctatgagttcaagagcaccgtggacaag
ctcattaagaagaccaacctggcgctggtgatcggcacacactcctggagggagcagttt
gtggaggcggtcactgtcagcgcaggtgacggagacgatgacgagggctgcgaggaacgc
cttccctcctgctacgactacgtcatgcatttcatcaccgtcttctggaaggtcctgttc
gcctgcgtccctcccactgagtgctggaacggctgggcctgcttcctggtatccatcagc
tccatcggcctcctcaccgccttcatcggggacctggcgtcccacttcggctgcaccgtc
ggcctccgggacaccgtgaccgccgtggtgtttgtggcactgggaacctccattccagac
accttcgccagcaaagtgtccgccatgcaggaccagcacgccgacgcgtccatcggcaac
gtcaccggcagcaacgccgtcaacgtgttcctgggcatcggcgtggcgtggtcagtggcc
gccatctactggcggatcaagggggaggagttcaaggtggacccgggctcgctggccttc
tctgtcacgctcttcaccgtattcgcctttatctgcatgggcgtgctgatgtaccgacgg
cggccctccatcggcggcgagctcgggggcccgaggggggcccgcctggtcacttgcctg
ctgttcctgggcctgtggttcctctacatcctcttctccagcctggaggcctactgccac
atcagcggcttttaa
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