Pseudoliparis swirei (Mariana hadal snailfish): 130210420
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Entry
130210420 CDS
T09868
Symbol
git1
Name
(RefSeq) ARF GTPase-activating protein GIT1 isoform X1
KO
K05737
G protein-coupled receptor kinase interactor 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04144
Endocytosis
pswi04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130210420 (git1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
130210420 (git1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130210420 (git1)
Membrane trafficking [BR:
pswi04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
130210420 (git1)
Endosome - Golgi transport
Arf GTPase associated proteins
130210420 (git1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIT1_C
GIT_CC
ArfGap
GIT_SHD
Ank_2
Ank
Ank_4
Ank_5
TTRAP
T7SS_ESX_EspC
Motif
Other DBs
NCBI-GeneID:
130210420
NCBI-ProteinID:
XP_056296682
LinkDB
All DBs
Position
20:complement(4998106..5017445)
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AA seq
794 aa
AA seq
DB search
MSRKLQRTEVCADCSAPDPGWTSINRGVLICDECCSVHRSLGRHISIVKHLRHSGWPPAL
LQMVQTLASNGANSIWEHSLLDPAQVQSGRRKPNPQDKVHPTKSEFIRAKYQMLAFVHKL
PCRDDDGVTTKDLSKQLHSSVRTGSLETCLRLLSLGAQANFFHPEKGTTPLHVAAKAGQI
LQAELLVVYGADPGAPDINGRTPMDYARQAGHIELAERLVECQYELTDRLAFYLCGRRPD
HKNGHYIIPQMADRARPKCPTQSLDLSELAKAAKKKLQALNNRLFEELAMDVYDEVDRRE
NDAVWLTTQNHSTLVTERSAVPFLPVNPEYSATRNQGRQKLARFNAREFATLIIDILSDA
KRRQQGKGLSSPTDTLDLGIDDDQHDYDSVASDEDTDSELTTQNNNNTQRNNRAKSMDSS
DLSDGPITLQEYLEVKKALASSEAKVQQLMKVNNNLSEELRRLQKEITRMQTENSAMRGC
QQAGGPAGHGVGGPGGGSGGGGGGGGGGGHWQGGGMRGGVGGGGPGGFGTGADPPGLSVP
SSAAPNSHPYRRDRQAFSMYEPGAGPGPTAHGPPVLDSLAARLQPLNTPSGRKGGTGGPA
SYGGHHLSGSTEMSRYMSTKSEKHGSGTDSDYDNTQTYDFSLSMGRSSEEEGRGDSEEGG
GGEAWEPDPTLPGTEDVILKTEQVTKNIQELLRAAQEFKHDSFVPCSEKIHSAVTEMASL
FPRRPALDAVHSSLRLLASSASRLQVECRKAAPSEPGGPAVDYQLLTQQVIQCAYDIAKA
AKQLVTITTREKKQ
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaggaagctacagaggacagaggtctgcgccgactgcagtgcgccagacccgggc
tggaccagtatcaaccgaggggtcctgatctgtgatgaatgctgttcagtccaccgcagt
ttaggccgccacatctccatagtcaagcacctgaggcacagcggatggcctccagcactc
ctgcagatggttcagaccttggccagtaacggggccaactcaatatgggaacacagtctc
ctggaccctgctcaggtacagagcggtcggaggaaacccaacccccaggacaaagtccat
cccacgaagtcagagttcatcagagcaaagtaccagatgctggcctttgtgcacaagctg
ccctgccgtgatgatgatggcgtcactaccaaggacctcagtaagcaactacactcgagt
gtgcggacggggagtttggagacgtgtcttcggctcctgtcactcggcgctcaggccaac
ttcttccacccggagaaaggcacgaccccgctccatgtggcagccaaggcggggcagatc
ctgcaggccgagctgctggtggtgtacggcgctgaccccggagcgcctgacatcaacgga
cgcacaccgatggactacgcgaggcaggccggccatatcgagctagcggagcggctggtc
gagtgtcagtacgagctgacggacagactcgctttctacctttgtggacggcgtccagat
cacaagaatggccattacatcattcctcaaatggcagacagagctcgtcctaagtgccca
acacagagtctggacctctccgaattggccaaggcggccaagaagaagctccaagcgctc
aacaaccggctgtttgaggagctagcgatggacgtctatgacgaggtagaccgccgagaa
aacgatgcagtttggcttacgacccagaaccacagcactctggtcaccgagcgcagcgcg
gtgcccttcctgccagtcaaccctgaatactctgccacgcgcaaccagggccgtcagaag
ctggctcgcttcaacgctcgggagttcgccacgctcatcatcgacatcctgagcgacgcc
aagaggagacagcaggggaaaggactcagcagccctactgacacgttagatctgggcatc
gacgatgaccagcacgactacgacagcgtagcgtcggatgaagacacggacagcgagctg
accacgcagaacaacaacaacacgcaacgcaacaaccgggcaaagagcatggactcgtca
gacctgtcggacggccccatcaccctgcaggagtacctggaggtgaagaaggcgctggcc
tcctccgaagccaaggtgcagcagctgatgaaggtcaacaacaacctgagcgaggagctc
cggcggctccagaaggagatcacacggatgcagacagagaacagtgcgatgcgggggtgc
cagcaggctggggggccagctggccatggggtagggggacctggcggcggcagcggtgga
ggaggaggaggaggaggtggaggaggccactggcaagggggcgggatgagaggaggtgta
ggcggagggggcccgggtgggttcgggacgggagcggaccccccagggctgtcggtgccc
tcctcagccgcccccaactcccacccctaccgacgggaccgccaggccttctccatgtac
gagccaggggcgggccccggccccacggcccatggccccccagtcctggactccctggca
gcccgcctgcagcccctcaacacacccagcggacggaagggcggcacagggggcccggcg
tcgtacgggggccatcatctgtccgggtcgaccgagatgagccggtacatgtcgaccaaa
tcggagaagcacggcagtggcaccgacagcgactacgacaacacgcagacgtacgacttc
tcgctaagtatgggccgcagcagcgaggaggaaggccgcggggattctgaggagggggga
ggcggggaggcgtgggagccggaccccaccttgcccggcacggaggacgtcatcctgaag
acggagcaggtgaccaagaacatccaggagctgctgagggcggcccaggagttcaaacac
gacagcttcgttccgtgctccgagaagatccactcggctgtcaccgagatggcctcgctg
ttccccagacgcccggcgttggacgcggtgcacagctccctgcgcttgttggcctccagc
gcctcgcggttgcaggtggagtgccgcaaggcagcgccctcggagcccgggggccccgcg
gtggactaccagctcctcacccagcaggtcatccagtgcgcctacgacatcgccaaggcc
gccaagcaactggtcaccatcacgacccgggagaagaaacagtga
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