Pseudoliparis swirei (Mariana hadal snailfish): 130210466
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Entry
130210466 CDS
T09868
Symbol
trim59
Name
(RefSeq) tripartite motif-containing protein 59
KO
K12028
tripartite motif-containing protein 59
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130210466 (trim59)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130210466 (trim59)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
TRAF3_RING
Trm112p
AveC_like
MgrB
B2
Motif
Other DBs
NCBI-GeneID:
130210466
NCBI-ProteinID:
XP_056296779
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All DBs
Position
20:complement(20389009..20395520)
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AA seq
437 aa
AA seq
DB search
MDSLEEDLTCSVCYSLFADPRVLPCSHTFCKSCLDNLLQVSTNYSIWRPLRLPLKCPQCR
GVVELPPMGVDSLPANVSLRAIIEKFQSDGAPRPPSCQEHHRQPLNMYCIQDRQLICGLC
LTVGQHQGHPIDDLQAAFNREKQTPSRLLASLSEQRWGQVCELGERLQQEKVRCEGLVMQ
DRREVNQFFHSLEVVLTRKRHAYLEALDTAGAEVCRAYDPLIHRVKALQEEHLDLVSLGS
SVEEEDSPLIFLEQVHLFRERVEEFIKTPLPSVIKLSVTPRAAEHLQLHWPAVTIGSLED
APVPKVCCCARCGSVEAGVETEAGGRDRADGTGRTPWWERQHALSVVVLLVLLLLVQLLV
LLLWFNPVTEESLGFYLFPQFSQFVHGLNDELAKYLWDTAGSASAAVEAAVERWSSHLSS
VGEKTSQQLAAFFKKSD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggacagcctcgaggaggacttgacgtgctctgtgtgctactctctgttcgctgacccg
cgcgtcctgccgtgctcgcacaccttctgtaagagctgcctggataacctgctccaggtg
tctaccaactattccatctggcgtccactccgcctgccgctcaaatgcccccaatgccgc
ggcgtggtcgagctgcccccgatgggcgtcgactctctgcccgccaacgtatctctgcga
gccatcatcgagaaattccagagcgacggcgcgccgcgacccccttcctgtcaggagcac
cacaggcagcctctgaacatgtactgcatccaggaccggcagctgatctgtgggctgtgt
ctgaccgtcgggcagcaccagggccatcccatagatgaccttcaggcggcattcaacaga
gaaaaacagactccatcgcgactgctggccagcctctctgagcagagatggggacaggtg
tgtgagctgggggagcggctgcagcaggagaaggtgcgctgtgagggtcttgtgatgcag
gaccgacgggaggtcaatcagttttttcactcgctggaggtggtgctgaccaggaagaga
cacgcctacctggaggccctggatacagcgggagcagaggtgtgccgggcgtacgacccg
ctcattcacagagtgaaggccctccaggaagaacacttggacctggtgtccctgggttca
tccgtggaggaggaggactcgccgttgatcttcctggagcaggtccacttgttccgagag
cgggttgaagagtttattaaaaccccgctgccctcggtgataaagctgtccgtcactccg
cgggcagcggagcacctgcagctgcactggcccgctgtgactatcgggagcctggaggac
gcacctgtccctaaggtgtgctgctgcgccagatgtggcagcgtggaggctggcgtggaa
acggaagccggaggaagggatcgggccgacggcacggggcggacgccgtggtgggaacgg
cagcacgctctatcggtggtggtgctgctggtgctgctgctgctggtgcagctgctggtg
ctgctgctctggttcaacccggtcacggaggagtcacttggtttctatctgttccctcag
tttagtcagttcgtccacggcctgaacgatgagctggccaaatatctctgggacacggca
ggatcggcctccgctgcggtggaggccgctgtagagagatggagctctcacctctcctca
gtgggggaaaagacctcccagcagctggctgcctttttcaaaaaatctgactga
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