Pseudoliparis swirei (Mariana hadal snailfish): 130210486
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Entry
130210486 CDS
T09868
Symbol
cadm1b
Name
(RefSeq) cell adhesion molecule 1b isoform X1
KO
K06781
cell adhesion molecule 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130210486 (cadm1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pswi04515
]
130210486 (cadm1b)
Cell adhesion molecules [BR:
pswi04515
]
Immunoglobulin superfamily
Nectin family
130210486 (cadm1b)
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GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
C2-set_2
V-set
C1-set
KOW2_Spt5
Flg_hook
Motif
Other DBs
NCBI-GeneID:
130210486
NCBI-ProteinID:
XP_056296820
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Position
20:18728517..18860181
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AA seq
420 aa
AA seq
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MAITGSGSLAITLSLFVVSAAFLPKGAAETLTVEGQNLATDNVSVIEGELATISCRVKDN
DDSVIQLLNPNRQTIYFKDVRPLKDSRFQLVNFSDNELRVSLSNVSLSDEGRYVCQLYTD
PPQEAYADITVLVPPGNPIIESREDVVSEGNETQLTCIAMGSKPAASIRWMKGDKELTGE
TTVEETYDRMFTVSSRVRISVTKEDDGVPVDCIIEHPAVKDLLAQRHLDVLYKPEVKVMV
TYPDGLTREGDNLDLTCIAEGKPHPHQINWLRVDEDMPPHAVVTGSDLYIENLNKSYNGT
YRCVASNTVGEAYDDFTLFVYDAPTTIPTPTTNPVNTQDSRAGEGAPQKIDHAVVGGVVA
VVMFAILCALIVLGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGHNNTDEKKEYFI
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcacggggagcggatctctcgctattactctctctcttttcgtggtttcagcg
gcgtttcttccgaaaggagctgctgaaaccctgacagtcgaaggtcagaacctggcgacc
gacaacgtgtcggtgatcgagggggaactggccaccatcagctgcagagtgaaggacaac
gacgactccgtcatccagctgctcaatcccaacaggcagaccatctacttcaaagatgtt
agacctctgaaggacagccggttccagctggtgaatttctctgacaacgaactgcgcgtg
tctctgtccaatgtgtcactctccgatgaaggacgctatgtgtgccagctctacacagat
cctcctcaggaagcctacgccgacatcactgtcctggtcccgccaggcaacccaatcatc
gagagccgtgaggatgtggtcagcgaggggaacgagacgcagctcacctgcatagccatg
ggcagcaagccggccgcctccatcagatggatgaaaggggacaaagaactgacaggtgag
acaacagttgaggagacgtatgacaggatgttcaccgtctcaagccgtgtcagaatttct
gtcaccaaagaggatgatggagtgccagtggactgcatcattgagcacccagctgtaaag
gacctcctggctcaaagacacttggacgtgctatataaaccagaagtgaaggttatggtg
acatatcctgacggtttaaccagagagggggacaatctagatttgacatgtattgcagaa
ggaaaaccacatccccatcagatcaactggctgagagtagacgaggatatgccgcctcac
gccgtggtcactggctctgatctgtacatcgagaaccttaacaagtcctacaatggcacc
tatcgctgcgtggcatccaataccgtgggagaggcctacgacgacttcacactctttgta
tatgatgctcccactactatccccacacccaccaccaacccagtcaacacgcaagactcc
agagccggtgagggggcaccacagaaaattgaccacgctgtcgtcggaggagtggttgcc
gtggtgatgtttgccatcctatgtgcactcattgttcttggtcgatactttgccagacac
aaaggaacttacttcacacatgaagccaaaggggcagacgatgcagccgatgcagacaca
gccatcatcaatgcggagggcggacacaacaacacggacgagaagaaggagtactttatc
taa
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