Pseudoliparis swirei (Mariana hadal snailfish): 130210494
Help
Entry
130210494 CDS
T09868
Symbol
rrp8
Name
(RefSeq) ribosomal RNA-processing protein 8
KO
K14850
ribosomal RNA-processing protein 8 [EC:
2.1.1.287
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pswi03009
]
130210494 (rrp8)
Enzymes [BR:
pswi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.287 25S rRNA (adenine645-N1)-methyltransferase
130210494 (rrp8)
Ribosome biogenesis [BR:
pswi03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
130210494 (rrp8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_8
Methyltransf_11
Methyltransf_25
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
130210494
NCBI-ProteinID:
XP_056296830
LinkDB
All DBs
Position
20:17135373..17139537
Genome browser
AA seq
550 aa
AA seq
DB search
MFNEDDDWSDEQDAQTQNTTVLRSTKKANSSTNVKSNVVGKKSLMRTLQTLGSVPEWKND
DHQQDSDSEADVAPTHSKRKKKKRKKRKKVETTGEQQESGDLDQTTNGQALASKKRKKDD
TFVAALKLKTSSVKKTSDNDIIKSKPENMEGLNRQQWKNKMKNKRKCTNKYSQNEPERKI
NKAESAEQHEPKEEVKIDSYSNNNNNSQTPAKKKQSKPQKIKKIKVDTDVSVPTDTRPLR
EEKQRIVLKVGKDTTESSAKQEAAVPRVENGGEQHQSPLKRPKPEMSREQILKREKLRKL
LHRREPVQRESPAETEDTPLSPEEELKPDRSASLRSRMEQRLESARFRYINEVLYSTSSG
EAKRMFKQDPQAFEIYHRGYTAQVQRWPANPVDAIISYIQQKPPSLVVADFGCGDCKIAR
SVKNKVHSFDLAAACKDVTICDMANVPLRDGCVDVAVFCLSLMGTNLADFLAEANRVLKK
GGVLKIAEVASRFENVRNFISALAGLGFKLVNQDTKSTHFYSFELLKTGDTPENIKKFGL
QLRPCLYKKR
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgaagatgatgactggagtgacgaacaagacgctcagacgcaaaacacaact
gtgctccgaagcactaagaaggcgaacagcagcacgaatgtcaagtccaatgtggttggg
aagaagagcctgatgcggaccctgcagacactggggtcagtaccagagtggaagaatgac
gatcatcagcaggacagcgacagtgaggccgatgtggccccaacacacagcaagagaaag
aagaaaaagaggaagaagcgaaagaaagttgagacaacaggagagcagcaagagagtgga
gacttggaccagaccactaatgggcaggcacttgcatcaaaaaagaggaagaaagacgac
acatttgtggcggctctgaagttaaaaacctcatccgtgaagaaaacatcagataacgat
attatcaaatccaaaccagagaacatggagggactgaacagacaacagtggaaaaacaaa
atgaagaacaagaggaaatgtacaaataaatacagtcagaatgagccagagaggaaaatc
aataaagctgaatctgcggagcaacatgagccaaaagaggaagtcaaaatagattcatat
agcaacaacaacaacaacagtcagaccccagccaagaaaaagcaaagtaaaccacagaaa
ataaaaaagatcaaagtggacactgacgtatctgttcccacagacacacggcccctcaga
gaggaaaagcagcgaattgttctcaaagttggaaaagacacaactgaaagttctgcaaaa
caggaagcagctgtaccgcgggtggagaacggaggtgagcagcaccagtcgcctttgaaa
agacccaaacccgagatgagcagagaacagattctgaaaagagagaagctacggaaattg
ctccaccgacgggaaccagtccaacgggagagtcccgctgagacggaagacacgcctttg
agcccagaggaggagctgaaaccggaccgctccgcctccctgaggtcccgcatggagcag
cggctggagtcggcgcgttttcggtacattaatgaagttttgtacagcacgtccagcggc
gaggcgaagcgcatgttcaaacaggatccgcaggccttcgagatctaccacagaggatac
acggcgcaggttcagcggtggcccgccaacccagtggatgccatcatctcttacatccaa
cagaaacctccctctctggtggttgcagactttggttgtggcgactgtaagatcgcgcgc
agcgtgaagaacaaagtgcacagcttcgacctggcagctgcctgcaaagatgtcacgatc
tgtgacatggccaacgtcccgcttcgtgacggctgtgtggacgtcgccgtgttctgcctc
tctctcatgggaaccaacctggccgattttctagcagaggccaaccgtgtgttaaagaag
gggggtgtcctgaagatagcggaagtggcgagcaggttcgagaatgtgcggaactttatc
agcgcgctggcaggactgggatttaagctggtgaaccaggacaccaagagcactcatttc
tactcctttgaattactgaagacgggagacactccagaaaatatcaagaaatttggactt
cagttgaggccctgcctctacaagaaaagatga
DBGET
integrated database retrieval system
