Pseudoliparis swirei (Mariana hadal snailfish): 130210529
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Entry
130210529 CDS
T09868
Symbol
ssh2a
Name
(RefSeq) LOW QUALITY PROTEIN: protein phosphatase Slingshot homolog 2
KO
K05766
protein phosphatase slingshot [EC:
3.1.3.16
3.1.3.48
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
130210529 (ssh2a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pswi01009
]
130210529 (ssh2a)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
130210529 (ssh2a)
3.1.3.48 protein-tyrosine-phosphatase
130210529 (ssh2a)
Protein phosphatases and associated proteins [BR:
pswi01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Dual specificity phosphatases)
Slingshots
130210529 (ssh2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_SSH1-like_1st
DSPc
DEK_C
PTP-SAK
Y_phosphatase
BpuSI_N
Motif
Other DBs
NCBI-GeneID:
130210529
NCBI-ProteinID:
XP_056296892
LinkDB
All DBs
Position
20:complement(5058211..5084890)
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AA seq
1262 aa
AA seq
DB search
MALVTVQRSPTPSTTSSPSVSESGSGEDDRRSQPRSISESFLTVKGAALFLPRGNSPTPN
SAPHMNQRRNKHTGDLQKHLQTMFTVLRPEDTIRLAVRLESAYPQVTRYMVVVSTNGRQD
TEESIVLGVDFVSSDGCTVGLVLPLWSDTLIHLDGDGGFSVSTVNRVHVFKPVSVQAMWS
ALQSLHKACDVARCHNHYPGSLFLTWVSYYQSRLSSNQVCVNEWNAMQDVESHRANSPVL
FTDLPTEGERTERLIKMRLREIMIQKDLENVTCKEIRTELEMQMVCNLREFKEFIDNEMI
AILGQMDSPTEIFEHVYLGSEWNASNLEELQNSGVLYILNVTREIDNFFPGMFQYHNIRV
YDEEATNLLEYWNETYKFITKAKKAGAKCLVHCKMGVSRSASTVIAYAMKEYGWDLDTAF
DYVKEKRAVTKPNPSFMKQLEEYQGILLASKQRHNKLWRSHSDGDLSDRPDSMCRASSRS
LGRSNSHNNNTTSASSPSLHHFLGVAVLHALGAAPEDSGEANSPCDSDSHSDGACDSPDP
EEVGSGCGGPRLLPLPRAAAAPEEGLDNSPSVAVAVTAALPHPPPSLHILPPTPELQRAR
RAPPTQLSISVAKHKASEPSLNLPERSSSEETSTLTLGSADSDVLERSLSDVASGEQSPL
GALSPALPLAASDSNNNPSELKLWRGEADGSSSHSGDSIDFFSAREKFLGPAQDGRSRTL
SEQAQQRAPLSFEENEDTEKEEEEQSYASRQASPQSDDGVDKAGPDRAPHDNGVSVRHIV
TEIEAICHPAPSSSSLPPPSHSPPPVRSEHPPEAEAPEAAPGPPTPPSHPQSPSMLPHDW
PAGSVRRAADQLEQKLKQEMETAASQRSPLHSPSAEQPPVRLSPCPPSAEPPPLRSPRDR
TEQWVARGEAADEGERTGSRAAPGSSDTDDLPDPSRSPDSDISRVPVAVPAGGRVFTSTE
ESSLDASAQSQRRRQIQPLHTQDASHRMSLDGAAAQESDTAERMESGSRGGRGGCGCDAE
SRLARGSQELERIQRTLRELQAFLHEGVGPETTERPRGPRDVTDTEPELCDGSTSEQTPR
GPEVGRRRERQEGQSFLEPIAWRRAMELEARIRQAGLTPPSLMKRSASLAKLDRLELSAN
DLSDMDLRTHTRXAASHSQDSFSASHPDDTWKKQKVLARHALAEGTGSPRGGXPSSSSSP
SLFLSPSAAHRSPKDDTGEREEPGGAVAPARQQGARGHAARRSRKGSAEKKQQRGAVLYN
TM
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggtcaccgtccagcggtcgccgacgccgagcaccacctccagccccagcgtg
tctgagtcgggcagtggtgaggatgaccgtcgctcccagcccaggagtatcagtgagagt
ttcctcaccgtgaaaggcgccgccctgttccttcccaggggcaacagccccacgccgaac
tctgcgcctcacatgaaccaacgcaggaacaagcacacaggtgacctccagaaacatctt
cagaccatgttcactgtgctgcggccggaggacaccatccgactggccgtgcgtctggag
agcgcctaccctcaggtgacccgctacatggtggtggtctccaccaacggaaggcaggac
acggaggagagcatcgtgctcggcgtggactttgtctcctctgacggctgcacggtgggc
ctggtcctgccgctctggagtgacactctgatccacctggatggagacgggggttttagt
gtatcgacggtgaacagggttcatgttttcaagccagtttctgtccaggccatgtggtca
gccctccagtcgctccacaaagcatgcgatgtggcccgctgccacaaccactacccgggc
agcctgttcctgacctgggtcagctactaccagagccggctctcgtccaaccaggtctgc
gtcaacgagtggaacgccatgcaggacgtcgagtcgcaccgtgccaattcgcccgttctc
ttcacagacctgcccacagagggggagcgcacggagaggctgatcaagatgcgcctccga
gagatcatgatacagaaggacctggagaacgtcacctgtaaggagatccgaacggagctg
gagatgcagatggtttgtaacctgagggagtttaaggagttcatagacaacgagatgatc
gccatcctggggcagatggacagccccaccgaaatctttgaacacgtctatctgggctcc
gagtggaacgcctcgaatctggaggagctgcagaacagcggcgtgctctacatcctgaac
gtgaccagggagatagacaacttcttcccggggatgtttcagtaccacaacatccgagtg
tacgacgaagaggccaccaacctgctggagtactggaacgagacctacaagttcatcacc
aaagccaagaaagctggtgccaagtgtctggttcactgcaaaatgggcgtgagtcgctcc
gcctccacggtgatcgcctacgccatgaaggagtacggctgggacctggacacggccttc
gactacgtcaaagagaagcgggccgtcaccaagcccaacccgtccttcatgaagcagctg
gaggagtatcagggcattctgctggccagcaagcagaggcataacaagctgtggcgctcg
cactctgacggcgacctatcggatcgcccggactccatgtgcagagcctcgtctcgctct
ctgggccgctccaactctcacaacaacaacaccaccagcgcctcctccccctccttgcat
cacttcctgggcgtggccgtgctgcacgcgctcggcgccgcacccgaggactctggcgag
gcgaacagcccgtgcgactcagactcgcactccgacggcgcgtgtgactcgccggatccg
gaggaggttggctcgggttgcggaggcccccgcctgctgcccctcccccgagcagccgcc
gcccccgaggaagggctggacaattcacccagcgtggccgtcgctgtgaccgctgcttta
ccccaccctccaccatcactccacatcttaccgcccactccagaactccaacgtgcccgc
cgggctcctcccacacagctctccatctcagtggccaaacacaaagcgtcggaaccgtct
ctgaatttgcccgagcgcagcagctcggaagaaacctcgacgctcactctgggctccgcc
gactcggacgtcctcgagcgatcgttatcggacgtcgcgagcggcgagcagagccccctc
ggcgccctctccccggcgcttccgctcgccgccagcgactccaacaacaaccccagcgag
cttaagctctggcgcggcgaggccgacggctcgtccagccacagcggcgacagcatcgac
ttcttcagcgccagggagaagttcctgggcccggcccaagatggccggtcccggacactt
tctgagcaggcacagcaaagggcacctctgtcgtttgaggagaacgaagacaccgagaag
gaggaagaggagcaaagctatgcgagtcgtcaggcgtctccgcagtccgacgacggcgtc
gacaaagccggccccgaccgcgctcctcacgacaacggcgtgtcggtccgccatatcgtc
acggagatcgaagccatatgccaccccgccccctcctcttcgtccctcccgccgccctcc
cacagccctccgcccgtccgctctgagcatccgccggaggccgaggcgccggaagccgcg
cccggccctccgacgccgccctcccacccgcagtccccctccatgctgccgcacgactgg
ccggcgggctcggtgcggcgcgccgccgaccagctggagcagaagctgaagcaggaaatg
gagacggctgcgtcccagcgctcgccgctgcattcccccagcgccgagcagccgccggtc
cgactgtccccgtgtcccccgagcgccgagcctcctcccctccgctcgcctcgggaccgc
acggaacaatgggtcgctcggggagaggccgcggacgaaggggagcgcacggggtctcgg
gcggcgcccggctcctcggacacggacgacctcccggacccttcgcgctcccctgactct
gatatcagccgagtccccgtcgctgtgcccgcaggcggccgtgtgttcacgtcaacggaa
gaatcgtctctcgatgcctcggcccagtcccaaagacgacgccaaatccagccgcttcac
acccaggacgcctcccaccggatgagtctggacggggcggcggcgcaagagtcggacacg
gccgagcggatggagtccggctctcggggcgggcgggggggctgcggctgcgacgccgag
agccggctggcccgcggcagccaggagctggagaggattcagcggacgctccgcgagctg
caggccttcctccacgagggcgtcggcccggagacgacggagcggcctcgggggccgaga
gacgtcacggacactgagccggaactgtgcgacgggtccacttctgagcagaccccccga
ggcccggaagtagggcggcggcgagagaggcaagagggtcagagtttcctggagccgatc
gcgtggcgccgagcgatggagctggaggcccgcatccgccaggcgggcctcacgcccccg
tccctcatgaagcggtcggcctccttggccaaactggaccgtctggagctgtcggccaat
gacctcagcgacatggacctgaggacgcacaccaggngcgccgcgtcacattcccaggac
tccttctccgcgtctcaccccgacgacacctggaagaagcagaaggtgttggctcgccac
gcgctcgccgaggggaccggctcgccccgcgggggcnttccctcgtcgtcctcgtcgccc
tccctcttcctcagcccctccgccgcccaccgtagtcccaaagacgacacgggggagagg
gaggagccgggcggcgcggtcgccccggcgcgccagcagggggcccggggacacgcggcg
agacgatctcgcaaaggctccgctgagaagaagcagcagcggggggccgtgctgtacaac
accatgtga
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