Pseudoliparis swirei (Mariana hadal snailfish): 130210533
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Entry
130210533 CDS
T09868
Symbol
limk1a
Name
(RefSeq) LIM domain kinase 1a isoform X1
KO
K05743
LIM domain kinase 1 [EC:
2.7.11.1
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
130210533 (limk1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pswi01001
]
130210533 (limk1a)
Enzymes [BR:
pswi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
130210533 (limk1a)
Protein kinases [BR:
pswi01001
]
Serine/threonine kinases: TKL group
LISK family [OT]
130210533 (limk1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LIM
PDZ
Kdo
PDZ_2
PDZ_6
ABC1
RIO1
Haspin_kinase
B2
Motif
Other DBs
NCBI-GeneID:
130210533
NCBI-ProteinID:
XP_056296905
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Position
20:25681627..25737936
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AA seq
644 aa
AA seq
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MRLMLLCCTWKDERMGEEEARGSLPVCAGCKQRVRDEQYLQALGADWHTACFRCCECSAS
LSHWYYEKDGRLFCKKDYWDKFGELCHGCTDPITTGLIMVAGEQKYHPECFTCLNCRTFI
GDGDTYALVERSKLYCGPCYYETVVTPASPPCSRIPHTVTLVSIPASAEGSNGRRGRGFS
VAVDRPLSPTDGPDGHTVRVSQVEPDCISPDVKNSIHVGDRILEINGTPINNVPLDEIDL
LIQETSRLLQLTIERDPHSREEGGPPSPPALLPITQPPNSLRSRIITRSYSIDKSPGSSN
AASPVSQRKDIKRSESLRVVSNQTHRIFRPSDLIHGEVLGKGCFGQAIKVTHKETGEVMV
MKELIRFDDETQRTFLKEVKVMRCLDHPNVLKFIGVLYKDKRLNFIAEYIKGGTLREIIK
KMDSSYPWNQRVSFAKDIAAGMTYLHSMNMIHRDLNSHNCLVRENNTVVVADFGLARLMV
DDKHEEKSPQGKLPGNIRKHDRRKRYTVVGNPYWMAPEMIHGKSYDERVDIFSFGIMLCE
IIGRVNADPDYLPRAMDFGLNVSGFLEHFCPPDCPPTFFPMAAVCCELDADKRPAFSRLE
EWLQNLKMHLDIGLPLVSEVELLRTAFWENRGINGLHAHPEQPE
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgatgctgctctgctgcacctggaaggacgaacgcatgggagaggaggaagcc
agagggagtttgcccgtctgtgcgggatgcaaacagagggtccgcgatgagcagtacctc
caggccctcggcgccgactggcacaccgcctgcttcaggtgctgtgagtgcagcgcctcg
ctgtcacactggtactacgagaaggacggccggctgttctgcaagaaggactactgggac
aaattcggggagctgtgccacggctgcaccgacccgatcaccaccggcctcatcatggtt
gcaggagaacagaaatatcacccagaatgcttcacctgtctgaactgcaggacgttcatc
ggcgatggcgacacgtacgccctggtggagagatccaaactctactgcggcccgtgttac
tacgagacggtggtcacgccggcgtctccgccgtgctcgcggatccctcacacggtcacg
ctggtgtccatcccggcgtcggccgaggggagcaacggacgcagggggcggggcttctcc
gtggccgtcgaccggccgctgagcccgaccgacggtcccgatggacacaccgtcagagtc
tcccaggtggaaccagactgcatcagtccagatgtgaagaactccattcatgtaggagac
aggatcctcgaaatcaacgggacgccgattaacaacgtccctctggacgagatcgacctc
ctcatccaggagacgagccggctgctgcagctcaccatcgaacgcgacccccacagccgg
gaggagggcggccccccgtccccccccgccctgctgcccatcactcagccccccaacagc
ctgaggtcgcgtatcatcacgaggagctacagcatcgataagtcgcccggctccagcaac
gcggcgtcgcccgtctcccagaggaaggacatcaagcggtcggagtcgctccgcgtcgtg
tccaatcagacgcatcgaatcttccgcccgtctgacctcatccacggggaggtgctgggg
aaaggctgcttcggacaggccatcaaggtgacccacaaggaaaccggagaggtgatggtg
atgaaggagttgattcgctttgacgacgagacacagagaacattcctgaaagaggtgaag
gtcatgcgttgcctggatcaccccaacgtgctcaagttcatcggagtcctctacaaggac
aagaggctcaacttcatcgcagagtacatcaagggaggcaccttgagggagatcatcaag
aaaatggacagcagctatccctggaaccagagggtcagctttgccaaggacatcgcagca
ggaatgacatatctgcattccatgaacatgatccaccgggacctgaactcacacaactgt
ctcgtccgagagaacaacacggtggtggtggccgacttcgggctggctcggctgatggtg
gacgacaagcacgaggagaagtcgccgcagggtaaactgcccggcaacatcaggaagcac
gaccgcaggaagaggtacacggtggtggggaacccctactggatggcccccgagatgatc
cacgggaagagctacgacgagagagtggacatcttttcttttgggatcatgctctgcgag
atcatcggcagggtgaacgcggacccggactacctccccagggcgatggacttcggcctg
aacgtgtccggcttcctggagcacttctgtccacctgactgtcctccgaccttcttcccc
atggcggccgtgtgctgcgagctggacgcagacaaacggccggcgttctccagactcgag
gagtggctgcagaacctgaagatgcacttggacatcggtctgccgctggtgtccgaggtg
gagctgctgcgcacggcattctgggagaaccgcggcatcaacggccttcacgcccacccc
gagcagccggagtga
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