Pseudoliparis swirei (Mariana hadal snailfish): 130210562
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Entry
130210562 CDS
T09868
Symbol
sbds
Name
(RefSeq) ribosome maturation protein SBDS
KO
K14574
ribosome maturation protein SDO1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130210562 (sbds)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pswi03009
]
130210562 (sbds)
Ribosome biogenesis [BR:
pswi03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
130210562 (sbds)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
PriA_C
Dehydratase_SU
Motif
Other DBs
NCBI-GeneID:
130210562
NCBI-ProteinID:
XP_056296956
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Position
20:12700035..12702852
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AA seq
249 aa
AA seq
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MSIFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVVNWRAGAEKELDEVLQTHSVFVNV
SKGQVAKKDDLTKSFGTDDLTEICKEILTKGELQVSDKERHSQLETMFRDIATIVAEKCV
NPETKRPYTVNLIEAAMKDIHYSVKPNKSSKQQALEVIRQLKESMEIQRAHMRLRLVLPA
KEAKKLKEKLKPLLQVVESEDFDEQLEMVCLVDPGCFREIDELIRCDTRGRGSLEVLNLK
DVEEGDEKF
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtctatatttacgccaacaaaccaaatacgactgacaaatgtggcggtggtgcggatg
aagaagggagggaagcggtttgaaattgcctgctacaagaataaagttgtgaactggcga
gccggagcagagaaagaactggacgaggttctgcagacacactctgtcttcgttaatgtg
tccaaagggcaggtggcgaagaaggatgacttgaccaagtcttttgggacagatgatctg
acagaaatctgtaaagagatcctgaccaagggagaactccaagtgtcagacaaggaaagg
cattctcagctggagacgatgttccgggacattgcgactatcgtggcagagaaatgcgtc
aaccctgagaccaagaggccatacacggtcaatctcattgaggcggcgatgaaggacatc
cactactctgtcaagcccaacaagagctcgaaacagcaggctctggaagtgatccggcag
ctgaaggagtccatggagatccagagggcccacatgaggctgcgattggtgctgccagcc
aaggaggccaagaagttgaaggagaagctgaaaccactcctgcaggttgtggagagtgaa
gattttgatgagcagctggaaatggtgtgcctggtggatcccggctgcttcagggagatc
gatgagctgatccgctgtgataccagaggccgaggatctctggaggttctcaatctgaag
gacgtggaggagggagatgagaaattctag
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