Pseudoliparis swirei (Mariana hadal snailfish): 130210578
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Entry
130210578 CDS
T09868
Symbol
snrpd2
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130210578 (snrpd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pswi03041
]
130210578 (snrpd2)
03032 DNA replication proteins [BR:
pswi03032
]
130210578 (snrpd2)
Spliceosome [BR:
pswi03041
]
Complex A
U1 snRNP components
Sm proteins
130210578 (snrpd2)
U2 snRNP components
130210578 (snrpd2)
Complex B
U1 snRNP components
130210578 (snrpd2)
U4/U6.U5 tri-snRNP components
130210578 (snrpd2)
Complex C
U2 snRNP components
130210578 (snrpd2)
DNA replication proteins [BR:
pswi03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
130210578 (snrpd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
GIT1_C
Motif
Other DBs
NCBI-GeneID:
130210578
NCBI-ProteinID:
XP_056296981
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All DBs
Position
20:7040079..7044079
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AA seq
118 aa
AA seq
DB search
MSLLTKPKSEMTPEELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFD
RHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIIVLRNPLITGK
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgttaaccaagcccaagtccgagatgacccctgaggagctccagaaacgagag
gaagaggagttcaacaccggccccctgtcggtgctgacccagtccgtcaagaacaacact
caggtcctcattaactgtcgtaacaacaagaagctgctcggaagagtcaaggcgtttgac
aggcactgcaacatggtcttggagaatgtgaaggagatgtggacggaagttcccaagagc
gggaagggaaagaagaagtctaagcctgtgaataaggaccgctacatttccaaaatgttc
ctcagaggggattctgtcatcatcgtgctgagaaatcctctgatcacaggaaaataa
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